Factsheet for Zm00001d009146_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, extracellular

Predictor Summary:

plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plasma membrane
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
plasma membrane: 23353019
mitochondrion: 27297264

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040697_P001	Maize	cytosol, extracellular, plasma membrane	90.63	98.22
KXG32419	Sorghum	cytosol	90.4	97.97
Os01t0323600-01	Rice	plasma membrane	87.59	94.92
Os01t0207300-00	Rice	cytosol	36.07	93.9
Os07t0477250-00	Rice	cytosol	35.83	93.29
TraesCS2D01G042300.1	Wheat	cytosol	76.11	91.29
Zm00001d024754_P001	Maize	plasma membrane	84.78	91.18
Zm00001d010920_P001	Maize	plasma membrane	87.12	78.98
Zm00001d008175_P001	Maize	cytosol	11.01	55.95

Protein Annotations

KEGG:00270+2.5.1.6	EntrezGene:100282324	Gene3D:3.30.300.10	MapMan:7.3.1	UniProt:A0A1D6FHW2	InterPro:ADOMET_SYNTHASE_CS
ProteinID:AQK91397.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004478	GO:GO:0005488
GO:GO:0005524	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	HAMAP:MF_00086	PFAM:PF00438	PFAM:PF02772
PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF34
InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973
TIGRFAMs:TIGR01034	UniParc:UPI00084467C9	EnsemblPlantsGene:Zm00001d009146	EnsemblPlants:Zm00001d009146_P002	EnsemblPlants:Zm00001d009146_T002	SEG:seg

Description

S-adenosylmethionine synthase

Coordinates

chr8:+:39524418..39526647

Molecular Weight (calculated)

46236.0 Da

IEP (calculated)

5.916

GRAVY (calculated)

-0.252

Length

427 amino acids

Sequence
(BLAST)

001: MASPSSPETP CHTSIPVRLF SSLLPEVGRA SEKKAMAAES FLFTSESVNE GHPDKLCDQV SDAVLDACLA QDPDSKVACE TCTKTNMVMV FGEITTKASV
101: DYEKIVRDTC REIGFTSDDV GLDADRCKVL VNIEQQSPDI AQGVHGHFTK RPEEIGAGDQ GHMFGYATDE TPELMPLSHV LATKLGARLT EVRKDGTCAW
201: LRPDGKTQVT VEYVNEGGAM VPVRVHTVLI STQHDETVTN DEIAADLKEH VIKPVIPERY LDEKTIFHLN PSGRFVIGGP HGDAGLTGRK IIIDTYGGWG
301: AHGGGAFSGK DPTKVDRSGA YVARQAAKSI VASGLARRCL VQVSYAIGVP EPLSVFVDSY GTGTIPDKEI LKIVKENFDF RPGMITINLD LKKGGNRFIK
401: TAAYGHFGRD DADFTWEVVK PLKKASA

Best Arabidopsis Sequence Match ( AT3G17390.1 )
(BLAST)

001: MESFLFTSES VNEGHPDKLC DQISDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTK ANVDYEQIVR KTCREIGFVS ADVGLDADNC KVLVNIEQQS
101: PDIAQGVHGH LTKKPEEVGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTEVRKNGT CPWLRPDGKT QVTIEYINES GAMVPVRVHT VLISTQHDET
201: VTNDEIAADL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSIVASGLAR
301: RVIVQVSYAI GVPEPLSVFV DSYGTGKIPD KEILEIVKES FDFRPGMISI NLDLKRGGNG RFLKTAAYGH FGRDDADFTW EVVKPLKSNK VQA

Arabidopsis Description

METK4S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VIP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.