Factsheet for Os01t0323600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
mitochondrion: 19217306
plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 19217306 doi

X Chen, Y Wang, J Li, A Jiang, Y Cheng, W Zhang

Department of Biochemistry and Molecular Biology, Nanjing Agricultural University, Weigang, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32419	Sorghum	cytosol	96.19	96.19
Os07t0477250-00	Rice	cytosol	39.85	95.73
Zm00001d040697_P001	Maize	cytosol, extracellular, plasma membrane	95.18	95.18
Os01t0207300-00	Rice	cytosol	39.59	95.12
Os05t0135700-01	Rice	cytosol	92.64	92.17
TraesCS2D01G042300.1	Wheat	cytosol	82.99	91.85
Os01t0293000-01	Rice	cytosol	91.88	91.41
Zm00001d009146_P002	Maize	extracellular, mitochondrion, plasma membrane	94.92	87.59

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	EntrezGene:4326996	MapMan:7.3.1	UniProt:A0A0R7VIP9	InterPro:ADOMET_SYNTHASE_CS
ProteinID:BAC65881.1	ProteinID:BAS71862.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004478
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	EMBL:KM982773	HAMAP:MF_00086	EnsemblPlantsGene:Os01g0323600
EnsemblPlants:Os01t0323600-01	UniProt:P93438	PFAM:PF00438	PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497
ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF21	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N
InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973	TIGRFAMs:TIGR01034	EMBL:U82833
UniParc:UPI000005E644	RefSeq:XP_015613529.1	RefSeq:XP_015613535.1	RefSeq:XP_015613541.1	SEG:seg	:

Description

S-Adenosyl-l-methionine synthetase 2, S-adenosylmethionine synthetase 2Similar to S-adenosylmethionine synthase 2. (Os01t0323600-01)

Coordinates

chr1:-:12363841..12366314

Molecular Weight (calculated)

42903.1 Da

IEP (calculated)

5.941

GRAVY (calculated)

-0.264

Length

394 amino acids

Sequence
(BLAST)

001: MAAETFLFTS ESVNEGHPDK LCDQVSDAVL DACLAQDPDS KVACETCTKT NMVMVFGEIT TKATVDYEKI VRDTCRGIGF VSDDVGLDAD RCKVLVNIEQ
101: QSPDIAQGVH GHFTKRPEEI GAGDQGHMFG YATDETPELM PLSHVLATKL GARLTEVRKN GTCAWLRPDG KTQVTVEYLN DAGAMVPVRV HTVLISTQHD
201: ETVTNDEIAA DLKEHVIKPV IPDKYLDEKT IFHLNPSGRF VIGGPHGDAG LTGRKIIIDT YGGWGAHGGG AFSGKDPTKV DRSGAYIARQ AAKSIVASGL
301: ARRCIVQVSY AIGVPEPLSV FVDSYGTGKI PDKEILKIVK ENFDFRPGMM TINLDLKRGG NRFIKTAAYG HFGREDPDFT WEVVKPLKYE KASS

Best Arabidopsis Sequence Match ( AT1G02500.2 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.