Factsheet for TraesCS2D01G042300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G230100.1	Wheat	cytosol	93.82	84.77
TraesCS3D01G198600.1	Wheat	mitochondrion	93.54	84.52
TraesCS6D01G230000.1	Wheat	cytosol	92.98	84.01
KXG32419	Sorghum	cytosol	92.7	83.76
Zm00001d040697_P001	Maize	cytosol, extracellular, plasma membrane	92.13	83.25
Os01t0323600-01	Rice	plasma membrane	91.85	82.99
TraesCS6D01G159100.1	Wheat	plastid	87.64	78.79
Zm00001d009146_P002	Maize	extracellular, mitochondrion, plasma membrane	91.29	76.11
Os07t0477250-00	Rice	cytosol	34.83	75.61
Os01t0207300-00	Rice	cytosol	34.55	75.0

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	InterPro:ADOMET_SYNTHASE_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	PFAM:PF00438	PFAM:PF02772
PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF16
InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973
TIGRFAMs:TIGR01034	EnsemblPlantsGene:TraesCS2D01G042300	EnsemblPlants:TraesCS2D01G042300.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2D:+:15133734..15135475

Molecular Weight (calculated)

38532.2 Da

IEP (calculated)

7.341

GRAVY (calculated)

-0.212

Length

356 amino acids

Sequence
(BLAST)

001: MPYVLDACLA QDPDSKVACE TCTKTNMVMV LGKITTKATV HYEKIVRDTC RSIGFVSDDV GLDADRCRVL VNIEQQSPDI AQGVHGHFTK RPEEVGAGDQ
101: GIMFGYATHE TPELMPLSHV LATKLGARLT EVRKNGTCAW LRPDGKTQVT VEYLNEGGAM VPVRVHTVLI STQHDETVSN DEIAADLKEH VIKPVIPGKY
201: LDERTIFHLN PSGRFVIGGP HGDAGLTGRK IIIDTYGGWG AHGGGAFSGK DPTKVDRSGA YIARQAAKSI IASGLARRCI VQISYAIGVP EPLSVFVDSY
301: GTGKVPDGEI LVKENFDFRP GMISINLDLK KGGNRFIKTA AYGHFGRDDA TSPGRW

Best Arabidopsis Sequence Match ( AT1G02500.1 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.