Factsheet for TraesCS3D01G198600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytoskeleton, cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

mitochondrion: 23895732
golgi: 25769308
mitochondrion: 26136264

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 23895732 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks (CABiN), M316, The University of Western Australia , 35 Stirling Highway, Crawley, WA 6009, Australia.

msms PMID: 26136264 doi

S Wang, G Zhang, Y Zhang, Q Song, Z Chen, J Wang, J Guo, N Niu, J Wang, S Ma

College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China zhanggaisheng18@sohu.com., College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China., Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, P. R. China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G195300.1	Wheat	cytosol	99.75	99.75
TraesCS3B01G228500.1	Wheat	cytosol	99.75	99.75
TraesCS6D01G230100.1	Wheat	cytosol	97.21	97.21
TraesCS6D01G230000.1	Wheat	cytosol	96.95	96.95
TraesCS2D01G042300.1	Wheat	cytosol	84.52	93.54
TraesCS6D01G159100.1	Wheat	plastid	90.36	89.9

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	InterPro:ADOMET_SYNTHASE_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	HAMAP:MF_00086	PFAM:PF00438
PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964
PANTHER:PTHR11964:SF16	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam
SUPFAM:SSF55973	TIGRFAMs:TIGR01034	EnsemblPlantsGene:TraesCS3D01G198600	EnsemblPlants:TraesCS3D01G198600.1	SEG:seg	:

Description

No Description!

Coordinates

chr3D:+:213996926..213998110

Molecular Weight (calculated)

42820.0 Da

IEP (calculated)

5.801

GRAVY (calculated)

-0.213

Length

394 amino acids

Sequence
(BLAST)

001: MAAETFLFTS ESVNEGHPDK LCDQVSDAVL DACLAQDADS KVACETCTKT NMVMVFGEIT TKATVDYEKI VRDTCRNIGF ISDDVGLDAD RCKVLVNIEQ
101: QSPDIAQGVH GHFTKRPEDI GAGDQGIMFG YATDETPELM PLSHVLATKL GARLTEVRKN GTCAWLRPDG KTQVTVEYLN EGGAMVPVRV HTVLISTQHD
201: ETVTNDEIAA DLKEHVIKPV IPEKYLDEKT IFHLNPSGRF VIGGPHGDAG LTGRKIIIDT YGGWGAHGGG AFSGKDPTKV DRSGAYIARQ AAKSIIASGL
301: ARRCIVQISY AIGVPEPLSV FVDSYGTGKI PDKEILKIVK ENFDFRPGMI SINLDLKKGG NRFIKTAAYG HFGREDADFT WEVVKPLKFD KASA

Best Arabidopsis Sequence Match ( AT4G01850.1 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATIDYEKIVR DTCRSIGFIS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKRPEDIGA GDQGHMFGYA TDETPELMPL SHVLATKIGA RLTEVRKNGT CRWLRPDGKT QVTVEYYNDN GAMVPVRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPIIP EKYLDDKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYGTGLIPD KEILKIVKET FDFRPGMMTI NLDLKRGGNG RFQKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM2S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178V3V9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.