Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3D01G198600.1 | Wheat | mitochondrion | 99.75 | 99.75 |
TraesCS3A01G195300.1 | Wheat | cytosol | 99.49 | 99.49 |
TraesCS6B01G276700.1 | Wheat | golgi, plastid | 96.95 | 96.95 |
TraesCS6B01G276800.1 | Wheat | cytosol | 96.7 | 96.7 |
TraesCS6B01G197300.1 | Wheat | cytosol | 90.36 | 89.9 |
Protein Annotations
KEGG:00270+2.5.1.6 | Gene3D:3.30.300.10 | MapMan:7.3.1 | InterPro:ADOMET_SYNTHASE_CS | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004478 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006556 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | HAMAP:MF_00086 | PFAM:PF00438 |
PFAM:PF02772 | PFAM:PF02773 | PIRSF:PIRSF000497 | ScanProsite:PS00376 | ScanProsite:PS00377 | PANTHER:PTHR11964 |
PANTHER:PTHR11964:SF16 | InterPro:S-AdoMet_synt_C | InterPro:S-AdoMet_synt_N | InterPro:S-AdoMet_synt_central | InterPro:S-AdoMet_synthetase | InterPro:S-AdoMet_synthetase_sfam |
SUPFAM:SSF55973 | TIGRFAMs:TIGR01034 | EnsemblPlantsGene:TraesCS3B01G228500 | EnsemblPlants:TraesCS3B01G228500.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr3B:-:330799592..330801716
Molecular Weight (calculated)
42850.1 Da
IEP (calculated)
5.801
GRAVY (calculated)
-0.220
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MATETFLFTS ESVNEGHPDK LCDQVSDAVL DACLAQDADS KVACETCTKT NMVMVFGEIT TKATVDYEKI VRDTCRNIGF ISDDVGLDAD RCKVLVNIEQ
101: QSPDIAQGVH GHFTKRPEDI GAGDQGIMFG YATDETPELM PLSHVLATKL GARLTEVRKN GTCAWLRPDG KTQVTVEYLN EGGAMVPVRV HTVLISTQHD
201: ETVTNDEIAA DLKEHVIKPV IPEKYLDEKT IFHLNPSGRF VIGGPHGDAG LTGRKIIIDT YGGWGAHGGG AFSGKDPTKV DRSGAYIARQ AAKSIIASGL
301: ARRCIVQISY AIGVPEPLSV FVDSYGTGKI PDKEILKIVK ENFDFRPGMI SINLDLKKGG NRFIKTAAYG HFGREDADFT WEVVKPLKFD KASA
101: QSPDIAQGVH GHFTKRPEDI GAGDQGIMFG YATDETPELM PLSHVLATKL GARLTEVRKN GTCAWLRPDG KTQVTVEYLN EGGAMVPVRV HTVLISTQHD
201: ETVTNDEIAA DLKEHVIKPV IPEKYLDEKT IFHLNPSGRF VIGGPHGDAG LTGRKIIIDT YGGWGAHGGG AFSGKDPTKV DRSGAYIARQ AAKSIIASGL
301: ARRCIVQISY AIGVPEPLSV FVDSYGTGKI PDKEILKIVK ENFDFRPGMI SINLDLKKGG NRFIKTAAYG HFGREDADFT WEVVKPLKFD KASA
001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATIDYEKIVR DTCRSIGFIS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKRPEDIGA GDQGHMFGYA TDETPELMPL SHVLATKIGA RLTEVRKNGT CRWLRPDGKT QVTVEYYNDN GAMVPVRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPIIP EKYLDDKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYGTGLIPD KEILKIVKET FDFRPGMMTI NLDLKRGGNG RFQKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA
101: PDIAQGVHGH FTKRPEDIGA GDQGHMFGYA TDETPELMPL SHVLATKIGA RLTEVRKNGT CRWLRPDGKT QVTVEYYNDN GAMVPVRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPIIP EKYLDDKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYGTGLIPD KEILKIVKET FDFRPGMMTI NLDLKRGGNG RFQKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA
Arabidopsis Description
SAM2S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178V3V9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.