Factsheet for Zm00001d040697_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
plasma membrane: 23508561

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32419	Sorghum	cytosol	98.73	98.73
Os01t0323600-01	Rice	plasma membrane	95.18	95.18
Os07t0477250-00	Rice	cytosol	39.34	94.51
Os01t0207300-00	Rice	cytosol	39.09	93.9
TraesCS2D01G042300.1	Wheat	cytosol	83.25	92.13
Zm00001d024754_P001	Maize	plasma membrane	91.88	91.18
Zm00001d009146_P002	Maize	extracellular, mitochondrion, plasma membrane	98.22	90.63
Zm00001d010920_P001	Maize	plasma membrane	92.64	77.49
Zm00001d008175_P001	Maize	cytosol	11.93	55.95

Protein Annotations

KEGG:00270+2.5.1.6	EntrezGene:100194360	Gene3D:3.30.300.10	MapMan:7.3.1	InterPro:ADOMET_SYNTHASE_CS	UniProt:B4FIE9
EMBL:BT036887	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004478	GO:GO:0005488
GO:GO:0005524	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	HAMAP:MF_00086	ProteinID:ONM31848.1	PFAM:PF00438
PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964
PANTHER:PTHR11964:SF16	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam
SUPFAM:SSF55973	TIGRFAMs:TIGR01034	UniParc:UPI0001A595CB	EnsemblPlantsGene:Zm00001d040697	EnsemblPlants:Zm00001d040697_P001	EnsemblPlants:Zm00001d040697_T001
SEG:seg	:	:	:	:	:

Description

S-adenosylmethionine synthase 1

Coordinates

chr3:-:58920202..58921386

Molecular Weight (calculated)

42774.8 Da

IEP (calculated)

5.774

GRAVY (calculated)

-0.250

Length

394 amino acids

Sequence
(BLAST)

001: MAAESFLFTS ESVNEGHPDK LCDQVSDAVL DACLAQDPDS KVACETCTKT NMVMVFGEIT TKATVDYEKI VRDTCREIGF TSDDVGLDAD RCKVLVNIEQ
101: QSPDIAQGVH GHFTKRPEEI GAGDQGHMFG YATDETPELM PLSHVLATKL GARLTEVRKN GTCAWLRPDG KTQVTVEYVN EGGAMVPVRV HTVLISTQHD
201: ETVTNDEIAA DLKEHVIKPV IPEKYLDEKT IFHLNPSGRF VIGGPHGDAG LTGRKIIIDT YGGWGAHGGG AFSGKDPTKV DRSGAYVARQ AAKSIVASGL
301: ARRCLVQVSY AIGVPEPLSV FVNSYGTGTI PDKEILKIVK ENFDFRPGMI SINLDLKKGG NRFIKTAAYG HFGRDDADFT WEVVKPLKFD KASA

Best Arabidopsis Sequence Match ( AT3G17390.1 )
(BLAST)

001: MESFLFTSES VNEGHPDKLC DQISDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTK ANVDYEQIVR KTCREIGFVS ADVGLDADNC KVLVNIEQQS
101: PDIAQGVHGH LTKKPEEVGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTEVRKNGT CPWLRPDGKT QVTIEYINES GAMVPVRVHT VLISTQHDET
201: VTNDEIAADL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSIVASGLAR
301: RVIVQVSYAI GVPEPLSVFV DSYGTGKIPD KEILEIVKES FDFRPGMISI NLDLKRGGNG RFLKTAAYGH FGRDDADFTW EVVKPLKSNK VQA

Arabidopsis Description

METK4S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VIP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.