CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96026	Soybean	cytosol	22.01	68.66
GSMUA_Achr1P18400_001	Banana	cytosol	44.02	62.59
KRG96585	Soybean	cytosol, endoplasmic reticulum, nucleus	83.25	44.16
KRH68318	Soybean	endoplasmic reticulum	82.78	43.91
KRH12731	Soybean	endoplasmic reticulum	80.38	42.53
KRH02439	Soybean	nucleus	79.43	42.35
KRH50640	Soybean	endoplasmic reticulum	79.43	42.35
GSMUA_Achr3P12780_001	Banana	cytosol	79.43	42.13
KRH02438	Soybean	endoplasmic reticulum, nucleus	78.95	42.09
GSMUA_Achr8P06200_001	Banana	cytosol	78.47	41.73
Os05t0135700-01	Rice	cytosol	78.95	41.67
GSMUA_Achr1P15960_001	Banana	cytosol	78.47	41.62
TraesCS6B01G197300.1	Wheat	cytosol	78.47	41.41
TraesCS6A01G169300.1	Wheat	cytosol	78.47	41.41
TraesCS6D01G159100.1	Wheat	plastid	78.47	41.41
EES17665	Sorghum	cytosol	78.47	41.41
HORVU6Hr1G034650.1	Barley	plasma membrane	77.99	41.16
Os01t0293000-01	Rice	cytosol	77.51	40.91
KRH33763	Soybean	endoplasmic reticulum	76.08	40.87
EES02825	Sorghum	cytosol	77.03	40.66
KRH67734	Soybean	endoplasmic reticulum	75.12	40.26
VIT_07s0005g02230.t01	Wine grape	cytosol	79.9	40.05
KRH32501	Soybean	cytosol	73.21	39.23
KRH19887	Soybean	endoplasmic reticulum	72.73	38.97

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:35.1	UniProt:A0A0R0KXB0	EMBL:ACUP02000689	InterPro:ADOMET_SYNTHASE_CS
EnsemblPlantsGene:GLYMA_02G008700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004478	GO:GO:0005488
GO:GO:0005524	GO:GO:0006556	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	EnsemblPlants:KRH69160	ProteinID:KRH69160	ProteinID:KRH69160.1	PFAM:PF00438	PFAM:PF02773
ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF21	MetaCyc:PWY-5041	MetaCyc:PWY-5912	InterPro:S-AdoMet_synt_C
InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973	UniParc:UPI0006ED9043	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:879699..880793

Molecular Weight (calculated)

23161.0 Da

IEP (calculated)

7.164

GRAVY (calculated)

-0.214

Length

209 amino acids

Sequence
(BLAST)

001: MATETFLFTS ESVNEGLPDK LCDPDSKVAC ETCTKTNMIM VFGEITTEAN EHVIKPVIPE KYLDDKTIFH LNPSGRFVIG GPHGDAGLTG RKIIIDTYCG
101: WGAHGGGAFS GKDPTKQVDL HAGALFKFLM PLVFLSLCQF GTGKIPDKEI LQLVKKNFDF RPGMITINLD LKRGGHRFLK TAAYGHFGRE DPDFTWEVVK
201: PLKWDKPQA

Best Arabidopsis Sequence Match ( AT1G02500.1 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.