Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- mitochondrion 3
- cytosol 3
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH12731 | Soybean | endoplasmic reticulum | 89.79 | 95.7 |
KRH02439 | Soybean | nucleus | 89.07 | 95.66 |
KRH02438 | Soybean | endoplasmic reticulum, nucleus | 88.6 | 95.15 |
KRH50640 | Soybean | endoplasmic reticulum | 88.6 | 95.15 |
PGSC0003DMT400011943 | Potato | cytosol | 88.6 | 94.91 |
Solyc12g099000.1.1 | Tomato | nucleus | 88.6 | 94.91 |
VIT_14s0060g00480.t01 | Wine grape | cytosol | 88.6 | 93.48 |
GSMUA_Achr3P12780_001 | Banana | cytosol | 87.41 | 93.4 |
EES02825 | Sorghum | cytosol | 87.65 | 93.18 |
GSMUA_Achr1P15960_001 | Banana | cytosol | 87.17 | 93.15 |
HORVU6Hr1G034650.1 | Barley | plasma membrane | 87.17 | 92.68 |
EES17665 | Sorghum | cytosol | 86.94 | 92.42 |
TraesCS6D01G159100.1 | Wheat | plastid | 86.94 | 92.42 |
TraesCS6B01G197300.1 | Wheat | cytosol | 86.94 | 92.42 |
TraesCS6A01G169300.1 | Wheat | cytosol | 86.94 | 92.42 |
Os05t0135700-01 | Rice | cytosol | 86.94 | 92.42 |
Os01t0293000-01 | Rice | cytosol | 86.94 | 92.42 |
GSMUA_Achr8P06200_001 | Banana | cytosol | 85.99 | 92.11 |
VIT_07s0005g02230.t01 | Wine grape | cytosol | 90.02 | 90.89 |
GSMUA_Achr1P18400_001 | Banana | cytosol | 31.35 | 89.8 |
VIT_06s0061g00500.t01 | Wine grape | cytosol | 82.9 | 89.26 |
VIT_08s0007g05000.t01 | Wine grape | cytosol | 75.06 | 71.01 |
Zm00001d008175_P001 | Maize | cytosol | 11.4 | 57.14 |
VIT_03s0017g00080.t01 | Wine grape | cytosol | 9.26 | 52.7 |
Protein Annotations
KEGG:00270+2.5.1.6 | EntrezGene:100244176 | wikigene:100244176 | Gene3D:3.30.300.10 | MapMan:7.3.1 | InterPro:ADOMET_SYNTHASE_CS |
EMBL:AM427059 | EMBL:AM483606 | ProteinID:CAN75334 | ProteinID:CAN75334.1 | ProteinID:CAN75687 | ProteinID:CAN75687.1 |
ProteinID:CCB50287 | ProteinID:CCB50287.1 | EMBL:FN595749 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004478 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006556 | GO:GO:0006730 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0046872 | EntrezGene:METK2 | wikigene:METK2 |
HAMAP:MF_00086 | PFAM:PF00438 | PFAM:PF02772 | PFAM:PF02773 | PIRSF:PIRSF000497 | ScanProsite:PS00376 |
ScanProsite:PS00377 | PANTHER:PTHR11964 | PANTHER:PTHR11964:SF16 | InterPro:S-AdoMet_synt_C | InterPro:S-AdoMet_synt_N | InterPro:S-AdoMet_synt_central |
InterPro:S-AdoMet_synthetase | InterPro:S-AdoMet_synthetase_sfam | SUPFAM:SSF55973 | TIGR:TC60374 | TIGRFAMs:TIGR01034 | UniParc:UPI0002108464 |
ArrayExpress:VIT_05s0020g00670 | EnsemblPlantsGene:VIT_05s0020g00670 | EnsemblPlants:VIT_05s0020g00670.t01 | unigene:Vvi.11257 | unigene:Vvi.7459 | RefSeq:XP_002266358 |
RefSeq:XP_002266358.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:2540079..2542121
Molecular Weight (calculated)
46371.3 Da
IEP (calculated)
6.393
GRAVY (calculated)
-0.335
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLRAADLNL TTCFWNCLAQ LQPKHLSKME TFLFTSESVN EGHPDKLCDQ ISDAVLDACL QQDPDSKVAC ETCTKTNMVM VFGEITTKAN VDYEKIVRDT
101: CREIGFVSDD VGLDADNCKV LVNIEQQSPD IAQGVHGHLT KRPEEIGAGD QGHMFGYATD ETPELMPLSH VLATKLGARL TEVRKNGTCP WLRPDGKTQV
201: TVEYHNDGGA RVPIRVHTVL ISTQHDETVT NDEIAADLKE HVIKPVIPEK YLDEKTIFHL NPSGRFVIGG PHGDAGLTGR KIIIDTYGGW GAHGGGAFSG
301: KDPTKVDRSG AYIVRQAAKS IVANGLARRC IVQVSYAIGV PEPLSVFVDT YGTGKIPDRE ILKIVKENFD FRPGMISINL DLKRGGNGRF LKTAAYGHFG
401: RDDPDFTWEV VKPLKWEKTQ A
101: CREIGFVSDD VGLDADNCKV LVNIEQQSPD IAQGVHGHLT KRPEEIGAGD QGHMFGYATD ETPELMPLSH VLATKLGARL TEVRKNGTCP WLRPDGKTQV
201: TVEYHNDGGA RVPIRVHTVL ISTQHDETVT NDEIAADLKE HVIKPVIPEK YLDEKTIFHL NPSGRFVIGG PHGDAGLTGR KIIIDTYGGW GAHGGGAFSG
301: KDPTKVDRSG AYIVRQAAKS IVANGLARRC IVQVSYAIGV PEPLSVFVDT YGTGKIPDRE ILKIVKENFD FRPGMISINL DLKRGGNGRF LKTAAYGHFG
401: RDDPDFTWEV VKPLKWEKTQ A
001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA
Arabidopsis Description
SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.