CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72092	Canola	cytosol	99.73	99.73
CDY22010	Canola	cytosol	99.73	99.73
Bra000914.1-P	Field mustard	cytosol	100.0	92.88
AT4G01850.1	Thale cress	cytosol	98.63	91.6
CDX91837	Canola	cytosol	91.23	91.48
CDX80079	Canola	cytosol	91.51	85.42
CDX82370	Canola	cytosol	91.78	85.24
CDY37784	Canola	cytosol	91.23	85.17
GSMUA_Achr3P12780_001	Banana	cytosol	91.23	84.52
GSMUA_Achr1P15960_001	Banana	cytosol	90.96	84.26
CDY63017	Canola	cytosol	90.41	83.97
EES17665	Sorghum	cytosol	90.68	83.59
HORVU6Hr1G034650.1	Barley	plasma membrane	90.41	83.33
CDY48693	Canola	cytosol	89.59	83.21
GSMUA_Achr8P06200_001	Banana	cytosol	89.59	83.21
EES02825	Sorghum	cytosol	90.14	83.08
CDY33203	Canola	cytosol	84.66	82.84
CDX75007	Canola	cytosol	84.66	82.84
Os05t0135700-01	Rice	cytosol	89.86	82.83
TraesCS6A01G169300.1	Wheat	cytosol	89.86	82.83
TraesCS6B01G197300.1	Wheat	cytosol	89.86	82.83
TraesCS6D01G159100.1	Wheat	plastid	89.86	82.83
CDY46742	Canola	cytosol	84.93	82.67
Os01t0293000-01	Rice	cytosol	89.59	82.58
CDX79695	Canola	cytosol	84.38	82.13
CDX75914	Canola	cytosol, mitochondrion	91.78	71.58
GSMUA_Achr1P18400_001	Banana	cytosol	27.95	69.39

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	GO:A0A078CE02	InterPro:ADOMET_SYNTHASE_CS	EnsemblPlants:CDX74394
ProteinID:CDX74394	ProteinID:CDX74394.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004478
GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00112216001	PFAM:PF00438	PFAM:PF02772	PFAM:PF02773
PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF21	MetaCyc:PWY-5041
MetaCyc:PWY-5912	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam
SUPFAM:SSF55973	UniPathway:UPA00315	UniParc:UPI0004EE61B6	SEG:seg	:	:

Description

BnaA03g26530D

Coordinates

chrLK031800:-:2660042..2662180

Molecular Weight (calculated)

39957.5 Da

IEP (calculated)

5.821

GRAVY (calculated)

-0.319

Length

365 amino acids

Sequence
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRSIGFIS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKRPEDIGA GDQGHMFGYA TDETPELMPL SHVLATKIGA KLTEVRKNGT CRWLRPDGKT QVTVEYYNDN GAMVPVRVHT VLISTQHDET
201: VTNEEIARRF VIGGPHGDAG LTGRKIIIDT YGGWGAHGGG AFSGKDPTKV DRSGAYIVRQ AAKSVVANGM ARRALVQVSY AIGVPEPLSV FVDTYGTGLI
301: PDKEILKIVK ESFDFRPGMM TINLDLKRGG NGRFLKTAAY GHFGRDDPDF TWEVVKPLKW DKPQA

Best Arabidopsis Sequence Match ( AT4G01850.1 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATIDYEKIVR DTCRSIGFIS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKRPEDIGA GDQGHMFGYA TDETPELMPL SHVLATKIGA RLTEVRKNGT CRWLRPDGKT QVTVEYYNDN GAMVPVRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPIIP EKYLDDKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYGTGLIPD KEILKIVKET FDFRPGMMTI NLDLKRGGNG RFQKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM2S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178V3V9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.