Factsheet for GSMUA_Achr5P20990_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P08470_001	Banana	cytosol	95.2	95.2
GSMUA_Achr7P02130_001	Banana	cytosol	95.2	95.2
GSMUA_Achr1P12930_001	Banana	cytosol	94.7	94.7
GSMUA_Achr2P07970_001	Banana	cytosol	93.69	93.69
GSMUA_Achr3P12780_001	Banana	cytosol	93.18	93.65
GSMUA_Achr8P06200_001	Banana	cytosol	92.17	92.88
GSMUA_Achr1P15960_001	Banana	cytosol	91.92	92.39
GSMUA_Achr1P18400_001	Banana	cytosol	33.08	89.12
GSMUA_Achr5P26120_001	Banana	cytosol	86.62	87.72
GSMUA_Achr11P...	Banana	cytosol	85.61	87.15

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	InterPro:ADOMET_SYNTHASE_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0006730
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr5G20990_001	EnsemblPlants:GSMUA_Achr5P20990_001	EnsemblPlants:GSMUA_Achr5T20990_001	UniProt:M0T0C8	HAMAP:MF_00086	PFAM:PF00438
PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964
PANTHER:PTHR11964:SF16	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam
SUPFAM:SSF55973	TIGRFAMs:TIGR01034	UniParc:UPI000295CD72	SEG:seg	:	:

Description

S-adenosylmethionine synthase [Source:GMGC_GENE;Acc:GSMUA_Achr5G20990_001]

Coordinates

chr5:+:22887967..22889157

Molecular Weight (calculated)

43296.4 Da

IEP (calculated)

5.912

GRAVY (calculated)

-0.315

Length

396 amino acids

Sequence
(BLAST)

001: MAGSDTFLFT SESVNEGHPD KLCDQVSDAV LDACLEQDPD SKVACETCTK TNMVMVFGEI TTKANVDYEK IVRETCRNIG FVSDEVGLDA DRCKVLVNIE
101: QQSPDIAQGV HGHFTKRPEE IGAGDQGHMF GYATDETPEL MPLSHVLATK LGARLTEVRK NGTCPWVRPD GKTQVTVEYS NDHGAMVPVR VHTVLISTQH
201: DETVSNDEIA ADLKEHVIKP VIPEKYIDEK TIFHLNPSGR FVIGGPHGDA GLTGRKIIID TYGGWGAHGG GAFSGKDPTK VDRSGAYIVR QAAKSIVASG
301: LARRCIVQVS YAIGVPEPLS VFVETYGTGK IPDKEILRIV KENFDFRPGM ITINLDLKRG GNGRFLKTAA YGHFGRDDPD FTWEVVKPLK WEKPAA

Best Arabidopsis Sequence Match ( AT1G02500.2 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.