Factsheet for Bra021417.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53739	Canola	plastid	97.25	97.79
AT3G02730.1	Thale cress	plastid	90.11	92.13
Bra040596.1-P	Field mustard	plastid	87.91	88.4
Bra023564.1-P	Field mustard	plastid	71.98	70.05
VIT_04s0023g00740.t01	Wine grape	plastid	58.79	62.21
KRH00940	Soybean	nucleus, plastid	59.89	60.89
KRH40285	Soybean	plastid	59.89	60.22
GSMUA_Achr8P01040_001	Banana	plastid	58.24	59.22
Solyc05g056300.2.1	Tomato	plastid	56.59	56.59
PGSC0003DMT400059966	Potato	cytosol, extracellular, plastid	56.59	56.59
TraesCS3B01G453600.1	Wheat	plastid	57.14	55.03
TraesCS3A01G418400.1	Wheat	plastid	57.14	55.03
Os01t0913000-01	Rice	plastid	56.04	54.55
Zm00001d024835_P001	Maize	plastid	53.85	54.44
KXG21303	Sorghum	plastid	52.75	50.0
Zm00001d010871_P001	Maize	plastid	54.95	49.75
GSMUA_Achr11P...	Banana	mitochondrion	37.91	42.86
Bra036839.1-P	Field mustard	cytosol	21.43	34.21
Bra025762.1-P	Field mustard	cytosol	21.98	33.61
Bra012872.1-P	Field mustard	cytosol	20.88	33.33
Bra027837.1-P	Field mustard	cytosol	20.88	29.69
Bra027469.1-P	Field mustard	cytosol	19.78	29.27
Bra017898.1-P	Field mustard	cytosol	20.33	28.91
Bra036335.1-P	Field mustard	cytosol	18.13	28.21
Bra014037.1-P	Field mustard	cytosol	18.13	27.97
Bra028445.1-P	Field mustard	cytosol	19.23	26.32
Bra040318.1-P	Field mustard	cytosol	18.68	26.15
Bra016258.1-P	Field mustard	cytosol	20.88	25.17
Bra003976.1-P	Field mustard	cytosol	19.23	24.82
Bra040055.1-P	Field mustard	cytosol	18.68	24.82
Bra003977.1-P	Field mustard	cytosol	19.78	24.16
Bra001346.1-P	Field mustard	cytosol	20.88	23.17
Bra031769.1-P	Field mustard	cytosol	14.84	21.43
Bra014691.1-P	Field mustard	cytosol, mitochondrion	15.38	20.9
Bra007245.1-P	Field mustard	plastid	15.38	20.0

Protein Annotations

MapMan:10.5.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra021417	EnsemblPlants:Bra021417.1	EnsemblPlants:Bra021417.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766
UniProt:M4DY21	PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF258	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI0002544AF1	:	:	:	:	:

Description

AT3G02730 (E=3e-090) TRXF1, ATF1 | TRXF1 (THIOREDOXIN F-TYPE 1); enzyme activator

Coordinates

chrA01:-:25276524..25277343

Molecular Weight (calculated)

19792.9 Da

IEP (calculated)

9.007

GRAVY (calculated)

-0.094

Length

182 amino acids

Sequence
(BLAST)

001: MPLSLRLAPS PTALSPTTGG FSPAKKQCRI PSYSGVATTT RRIGFCSLDY VKRGDSSVVR CSLETVNVSV GQVTEVDKDT FWPIVKAAGE KIVVLDMYTQ
101: WCGPCKVIAP KYKALSEKYE DVVFLKLDCN PENRPLAKEL GIRVVPTFKI LKDNQVVKEV TGAKYDDLVA AIETARSASS SG

Best Arabidopsis Sequence Match ( AT3G02730.1 )
(BLAST)

001: MPLSLRLSPS PTALSPTTGG FGPSRKQCRI PYSGVPTTKI GFCSLDSRKR GDSSVVRCSL ETVNVSVGQV TEVDKDTFWP IVKAAGEKLV VLDMYTQWCG
101: PCKVIAPKYK ALSEKYDDVV FLKLDCNPDN RPLAKELGIR VVPTFKILKD NKVVKEVTGA KYDDLVAAIE TARSAASG

Arabidopsis Description

TRXF1TRXF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBJ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.