CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021417.1-P	Field mustard	plastid	97.79	97.25
AT3G02730.1	Thale cress	plastid	91.16	92.7
CDY51539	Canola	plastid	87.85	88.33
CDY28704	Canola	plastid	86.19	86.67
CDY38116	Canola	plastid	72.93	70.59
CDY69984	Canola	plastid	71.82	69.89
VIT_04s0023g00740.t01	Wine grape	plastid	59.12	62.21
KRH00940	Soybean	nucleus, plastid	60.22	60.89
KRH40285	Soybean	plastid	60.22	60.22
GSMUA_Achr8P01040_001	Banana	plastid	57.46	58.1
Solyc05g056300.2.1	Tomato	plastid	56.91	56.59
PGSC0003DMT400059966	Potato	cytosol, extracellular, plastid	56.91	56.59
TraesCS3B01G453600.1	Wheat	plastid	56.91	54.5
TraesCS3A01G418400.1	Wheat	plastid	56.91	54.5
Os01t0913000-01	Rice	plastid	55.8	54.01
Zm00001d024835_P001	Maize	plastid	53.59	53.89
KXG21303	Sorghum	plastid	52.49	49.48
Zm00001d010871_P001	Maize	plastid	54.7	49.25
GSMUA_Achr11P...	Banana	mitochondrion	37.02	41.61
CDX77974	Canola	cytosol	21.55	34.21
CDY39355	Canola	cytosol	22.1	33.61
CDY29406	Canola	cytosol	22.1	33.61
CDX90669	Canola	cytosol	20.99	33.33
CDY28996	Canola	cytosol	20.99	33.33
CDY34470	Canola	cytosol	10.5	32.76
CDY30901	Canola	cytosol	20.99	29.69
CDY45144	Canola	cytosol	20.99	29.69
CDY32970	Canola	cytosol	19.89	29.27
CDY43592	Canola	cytosol	19.89	29.27
CDY36029	Canola	cytosol	18.78	28.81
CDY27290	Canola	cytosol	19.89	28.12
CDY53958	Canola	cytosol	17.68	27.35
CDX73940	Canola	cytosol	20.99	27.14
CDY22165	Canola	cytosol	21.55	26.71
CDY35999	Canola	cytosol	20.44	26.43
CDY58647	Canola	cytosol	20.44	26.43
CDX67442	Canola	cytosol	19.34	26.12
CDY65333	Canola	cytosol	18.78	25.56
CDY11645	Canola	cytosol, plastid	20.99	25.17
CDY38768	Canola	cytosol, plastid	20.99	25.17
CDY23543	Canola	cytosol	19.34	25.0
CDY48387	Canola	cytosol	19.34	24.82
CDY23544	Canola	cytosol	19.89	24.32
CDY48388	Canola	cytosol	19.34	23.81
CDY03743	Canola	extracellular	11.05	23.26
CDY34646	Canola	cytosol	15.47	22.22
CDY32015	Canola	mitochondrion	18.23	21.85
CDX67647	Canola	mitochondrion	18.23	21.85
CDY67121	Canola	mitochondrion	17.68	21.05
CDY04457	Canola	cytosol	11.05	20.41
CDY70695	Canola	cytosol	15.47	20.29
CDX72138	Canola	mitochondrion	16.57	20.13
CDY27215	Canola	mitochondrion	16.57	20.13
CDY57101	Canola	cytosol	17.68	19.39
CDY37032	Canola	cytosol	19.34	18.72
CDX73752	Canola	cytosol, mitochondrion	21.55	17.73
CDY27984	Canola	nucleus	20.44	17.54
CDY00656	Canola	cytosol	21.55	10.46
CDY11641	Canola	plastid	11.6	10.14

Protein Annotations

MapMan:10.5.4	Gene3D:3.40.30.10	GO:A0A078IWH9	UniProt:A0A078IWH9	EnsemblPlants:CDY53739	ProteinID:CDY53739
ProteinID:CDY53739.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006662	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00011323001
InterPro:IPR013766	PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF258	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI0001B63747	:	:	:	:	:

Description

BnaAnng12670DBnaAnng12670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWH9]

Coordinates

chrLK033233:-:7254..8320

Molecular Weight (calculated)

19648.8 Da

IEP (calculated)

8.790

GRAVY (calculated)

-0.058

Length

181 amino acids

Sequence
(BLAST)

001: MPLSLRLAPS PTALAPTTGG FSPARKQCRI PYSGVATTTT RIGFCSLDYV KRGDSSVVRC SLETVNVSVG QVTEVDKDTF WPIVKAAGEK IVVLDMYTQW
101: CGPCKVIAPK YKALSEKYDD VVFLKLDCNP ENRPLAKELG IRVVPTFKIL KDNQVVKEVT GAKYDDLVAA IETARSASSS G

Best Arabidopsis Sequence Match ( AT3G02730.1 )
(BLAST)

001: MPLSLRLSPS PTALSPTTGG FGPSRKQCRI PYSGVPTTKI GFCSLDSRKR GDSSVVRCSL ETVNVSVGQV TEVDKDTFWP IVKAAGEKLV VLDMYTQWCG
101: PCKVIAPKYK ALSEKYDDVV FLKLDCNPDN RPLAKELGIR VVPTFKILKD NKVVKEVTGA KYDDLVAAIE TARSAASG

Arabidopsis Description

TRXF1TRXF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBJ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.