CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040318.1-P	Field mustard	cytosol	68.98	99.23
CDY57101	Canola	cytosol	62.03	70.3
CDX67442	Canola	cytosol	47.06	65.67
CDY65333	Canola	cytosol	46.52	65.41
AT5G39950.1	Thale cress	cytosol	45.99	64.66
KRH01124	Soybean	endoplasmic reticulum	42.78	60.15
VIT_14s0066g02560.t01	Wine grape	cytosol	42.78	58.82
PGSC0003DMT400003564	Potato	plastid	41.71	54.93
KRH40136	Soybean	endoplasmic reticulum	44.38	52.87
KRH40137	Soybean	endoplasmic reticulum	36.9	52.67
KRH01123	Soybean	cytosol	33.16	50.41
KRH40138	Soybean	cytosol, plastid	33.69	50.4
Os07t0190800-01	Rice	cytosol	35.29	47.83
Os03t0800700-01	Rice	plastid	34.22	47.76
Zm00001d034491_P001	Maize	plastid	33.69	47.37
HORVU5Hr1G107210.1	Barley	cytosol	33.16	47.33
TraesCS5D01G454800.1	Wheat	cytosol	33.16	47.33
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	33.16	47.33
TraesCS5A01G448200.1	Wheat	cytosol	33.16	47.33
GSMUA_Achr2P17710_001	Banana	cytosol	32.09	47.24
EER90722	Sorghum	cytosol	32.62	45.86
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	29.41	44.35
CDY27290	Canola	cytosol	29.95	43.75
CDY32970	Canola	cytosol	28.34	43.09
CDX77974	Canola	cytosol	26.2	42.98
CDY30901	Canola	cytosol	29.41	42.97
CDY39355	Canola	cytosol	27.27	42.86
CDY29406	Canola	cytosol	27.27	42.86
HORVU5Hr1G107170.1	Barley	cytosol	33.16	42.76
CDY53958	Canola	cytosol	26.74	42.73
CDY43592	Canola	cytosol	27.81	42.28
CDY45144	Canola	cytosol	28.88	42.19
CDX90669	Canola	cytosol	25.67	42.11
CDY28996	Canola	cytosol	25.67	42.11
Solyc02g087630.2.1	Tomato	plastid	37.97	42.01
CDY36029	Canola	cytosol	26.2	41.53
GSMUA_Achr7P16980_001	Banana	cytosol	22.46	40.78
KRH01119	Soybean	cytosol	29.95	40.0
CDY23544	Canola	cytosol	30.48	38.51
CDY11645	Canola	cytosol, plastid	31.02	38.41
CDY23543	Canola	cytosol	28.34	37.86
CDY38768	Canola	cytosol, plastid	30.48	37.75
CDY48387	Canola	cytosol	28.34	37.59
CDY48388	Canola	cytosol	28.88	36.73
CDY03743	Canola	extracellular	16.04	34.88
CDY34646	Canola	cytosol	21.93	32.54
GSMUA_Achr7P12220_001	Banana	cytosol	19.79	31.9
CDY34470	Canola	cytosol	9.63	31.03
CDY04457	Canola	cytosol	16.04	30.61
HORVU6Hr1G018190.1	Barley	mitochondrion	14.44	29.03
CDY70695	Canola	cytosol	21.39	28.99
CDX72138	Canola	mitochondrion	22.99	28.86
CDY27215	Canola	mitochondrion	22.99	28.86
CDY58647	Canola	cytosol	21.39	28.57
CDX73940	Canola	cytosol	21.39	28.57
CDY35999	Canola	cytosol	21.39	28.57
CDY22165	Canola	cytosol	21.93	28.08
CDY32015	Canola	mitochondrion	22.46	27.81
CDX67647	Canola	mitochondrion	22.46	27.81
CDY67121	Canola	mitochondrion	22.46	27.63
CDX73752	Canola	cytosol, mitochondrion	26.2	22.27
CDY69984	Canola	plastid	19.79	19.89
CDY38116	Canola	plastid	19.79	19.79
CDY51539	Canola	plastid	18.72	19.44
CDY53739	Canola	plastid	18.72	19.34
CDY27984	Canola	nucleus	21.39	18.96
CDY28704	Canola	plastid	18.18	18.89
CDY11641	Canola	plastid	16.58	14.98
CDY00656	Canola	cytosol	21.39	10.72

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	GO:A0A078HGR2	UniProt:A0A078HGR2	EnsemblPlants:CDY37032	ProteinID:CDY37032
ProteinID:CDY37032.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00063237001	InterPro:IPR013766	PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194
PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0004EE7F62	:	:	:

Description

BnaA04g26100DBnaA04g26100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGR2]

Coordinates

chrLK032390:+:104891..105727

Molecular Weight (calculated)

20997.0 Da

IEP (calculated)

6.508

GRAVY (calculated)

-0.350

Length

187 amino acids

Sequence
(BLAST)

001: MGTAISNMLG AGEGNESEHS GVTKLSSSAQ WQLHFNGMKD SNQLLVIDFS ASWCGPCKSF EPAVRHMAVK FTDVSFVKVD VDELPEVAKE FDVTAMPTFV
101: LMKNGKEVDR IVGAKQDELE NKVTKHRGGD SDDDHHQVKK TLFSYNNNKP LCNKTYINKW LFGDSYLSLM CDLIKKWFVE KVLNSVI

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.