Factsheet for GSMUA_Achr7P12220_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G018190.1	Barley	mitochondrion	34.48	43.01
GSMUA_Achr7P16980_001	Banana	cytosol	35.34	39.81
TraesCS5D01G454800.1	Wheat	cytosol	44.83	39.69
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	43.97	38.93
TraesCS5A01G448200.1	Wheat	cytosol	43.97	38.93
GSMUA_Achr2P17710_001	Banana	cytosol	42.24	38.58
Zm00001d034491_P001	Maize	plastid	43.97	38.35
EER90722	Sorghum	cytosol	43.1	37.59
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	39.66	37.1
Os07t0190800-01	Rice	cytosol	43.97	36.96
Os03t0800700-01	Rice	plastid	42.24	36.57
Bra017898.1-P	Field mustard	cytosol	37.07	33.59
KRH01123	Soybean	cytosol	35.34	33.33
GSMUA_Achr4P22400_001	Banana	cytosol, unclear	32.76	33.33
CDY27290	Canola	cytosol	36.21	32.81
CDY30901	Canola	cytosol	36.21	32.81
Bra027837.1-P	Field mustard	cytosol	35.34	32.03
CDY45144	Canola	cytosol	35.34	32.03
KRH40137	Soybean	endoplasmic reticulum	35.34	31.3
KRH40138	Soybean	cytosol, plastid	33.62	31.2
AT1G59730.1	Thale cress	cytosol	34.48	31.01
KRH74754	Soybean	cytosol	33.62	30.95
GSMUA_Achr2P17610_001	Banana	cytosol	30.17	30.7
KRH74753	Soybean	cytosol	31.9	29.84
VIT_01s0026g01460.t01	Wine grape	cytosol	31.03	29.75
KRH01124	Soybean	endoplasmic reticulum	33.62	29.32
Bra028445.1-P	Field mustard	cytosol	33.62	29.32
CDX67442	Canola	cytosol	33.62	29.1
KRH69384	Soybean	cytosol	31.9	28.91
CDY65333	Canola	cytosol	32.76	28.57
AT5G39950.1	Thale cress	cytosol	32.76	28.57
Solyc04g005810.2.1	Tomato	plastid	32.76	28.57
Bra040318.1-P	Field mustard	cytosol	31.9	28.46
KRH69383	Soybean	cytosol	31.03	28.35
PGSC0003DMT400003564	Potato	plastid	34.48	28.17
VIT_14s0066g02560.t01	Wine grape	cytosol	32.76	27.94
KRG99185	Soybean	cytosol, plastid	28.45	27.27
KRH45834	Soybean	cytosol, plastid	28.45	27.27
KRH01119	Soybean	cytosol	31.9	26.43
Solyc05g006830.2.1	Tomato	cytosol, plastid	30.17	25.93
Solyc05g006870.2.1	Tomato	cytosol	30.17	25.93
PGSC0003DMT400045450	Potato	cytosol	30.17	25.93
KRH40136	Soybean	endoplasmic reticulum	34.48	25.48
Solyc05g006860.2.1	Tomato	cytosol	29.31	25.19
Solyc05g006850.2.1	Tomato	cytosol	28.45	24.44
CDY03743	Canola	extracellular	18.1	24.42
Bra003977.1-P	Field mustard	cytosol	30.17	23.49
CDY38768	Canola	cytosol, plastid	30.17	23.18
Bra016258.1-P	Field mustard	cytosol	30.17	23.18
CDY48388	Canola	cytosol	29.31	23.13
Solyc02g087630.2.1	Tomato	plastid	33.62	23.08
CDY57101	Canola	cytosol	32.76	23.03
GSMUA_Achr5P27870_001	Banana	cytosol	27.59	22.7
CDY11645	Canola	cytosol, plastid	29.31	22.52
CDY04457	Canola	cytosol	18.97	22.45
AT1G69880.1	Thale cress	plastid	28.45	22.3
CDY23544	Canola	cytosol	28.45	22.3
KRH74748	Soybean	plastid	25.86	21.74
KRH69387	Soybean	plastid	25.86	21.74
GSMUA_Achr8P01700_001	Banana	cytosol	25.86	21.58
CDY23543	Canola	cytosol	25.86	21.43
CDY48387	Canola	cytosol	25.86	21.28
Bra003976.1-P	Field mustard	cytosol	25.86	21.28
CDY37032	Canola	cytosol	31.9	19.79
GSMUA_Achr5P26380_001	Banana	cytosol	19.83	17.83
GSMUA_Achr9P30140_001	Banana	cytosol	18.97	16.42
PGSC0003DMT400045460	Potato	cytosol	9.48	16.18
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	21.55	15.15
GSMUA_Achr8P01040_001	Banana	plastid	23.28	15.08
GSMUA_Achr11P...	Banana	mitochondrion	15.52	11.18
CDY11641	Canola	plastid	12.93	7.25

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006662	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G12220_001	EnsemblPlants:GSMUA_Achr7P12220_001	EnsemblPlants:GSMUA_Achr7T12220_001	InterPro:IPR013766
UniProt:M0TGW0	PFAM:PF00085	PANTHER:PTHR10438	PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	InterPro:Thioredoxin
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000295FFD0	SEG:seg	:	:

Description

Putative Thioredoxin H2-1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G12220_001]

Coordinates

chr7:-:9743281..9744068

Molecular Weight (calculated)

12616.1 Da

IEP (calculated)

6.497

GRAVY (calculated)

0.053

Length

116 amino acids

Sequence
(BLAST)

001: MGGLCSSQST AKEGESAVIA VHSAAVIAVH SAGEWAPKWQ SHTQSDKLMI IDFAASWCGP CRSIEPAIKE MSARFTNAVF LKVDVDDLPV MRHPSPLIAE
101: EISRVFPCNY LINTRS

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.