Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P26380_001 | Banana | cytosol | 66.42 | 68.99 |
| VIT_19s0014g05090.t01 | Wine grape | cytosol | 64.18 | 68.25 |
| VIT_00s0532g00030.t01 | Wine grape | cytosol | 64.18 | 68.25 |
| AT1G11530.1 | Thale cress | cytosol | 55.22 | 62.71 |
| KRH22228 | Soybean | cytosol | 56.72 | 62.3 |
| KRH55615 | Soybean | cytosol | 58.21 | 61.9 |
| KRH25890 | Soybean | nucleus | 57.46 | 61.11 |
| Bra031769.1-P | Field mustard | cytosol | 56.72 | 60.32 |
| CDY34646 | Canola | cytosol | 56.72 | 60.32 |
| KRH10686 | Soybean | cytosol | 55.22 | 59.68 |
| KRH27111 | Soybean | nucleus | 55.97 | 59.52 |
| Solyc02g079960.2.1 | Tomato | cytosol | 54.48 | 58.4 |
| PGSC0003DMT400055905 | Potato | cytosol | 54.48 | 58.4 |
| KRH21649 | Soybean | cytosol, plastid | 54.48 | 58.4 |
| KRH33304 | Soybean | cytosol | 53.73 | 57.14 |
| GSMUA_Achr4P22400_001 | Banana | cytosol, unclear | 32.09 | 37.72 |
| GSMUA_Achr2P17610_001 | Banana | cytosol | 28.36 | 33.33 |
| GSMUA_Achr5P27870_001 | Banana | cytosol | 32.09 | 30.5 |
| GSMUA_Achr8P01700_001 | Banana | cytosol | 30.6 | 29.5 |
| GSMUA_Achr2P17710_001 | Banana | cytosol | 26.87 | 28.35 |
| GSMUA_Achr7P16980_001 | Banana | cytosol | 18.66 | 24.27 |
| GSMUA_Achr9P10960_001 | Banana | mitochondrion, plastid | 22.39 | 24.19 |
| GSMUA_AchrUn_... | Banana | cytosol, plasma membrane, plastid | 26.12 | 21.21 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 16.42 | 18.97 |
| GSMUA_Achr8P01040_001 | Banana | plastid | 20.9 | 15.64 |
| GSMUA_Achr11P... | Banana | mitochondrion | 11.94 | 9.94 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr9G30140_001 | EnsemblPlants:GSMUA_Achr9P30140_001 | EnsemblPlants:GSMUA_Achr9T30140_001 | InterPro:IPR013766 |
| UniProt:M0U4S1 | PFAM:PF00085 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF242 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000295B682 | SEG:seg | : |
Description
Thioredoxin-like protein CXXS1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G30140_001]
Coordinates
chr9:+:33538640..33540506
Molecular Weight (calculated)
15269.3 Da
IEP (calculated)
4.605
GRAVY (calculated)
-0.222
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGQPQEQEQ QQQHPKSRVV KVDSEESWYL FITQANNQGC PVFVHFGASW CVPSLAMNSF FEELALTYQD ILFLVVDVDE VKGVASKMEV KAMPTFVLMR
101: DGAVLDKIVG ANPEEIRKRI DGFVQSFRRP NMVD
101: DGAVLDKIVG ANPEEIRKRI DGFVQSFRRP NMVD
001: MARVVKIDSA ESWNFYVSQA KNQNCPIVAH FTALWCIPSV FMNSFFEELA FNYKDALFLI VDVDEVKEVA SQLEVKAMPT FLFLKDGNAM DKLVGANPDE
101: IKKRVDGFVQ SSRVVHIA
101: IKKRVDGFVQ SSRVVHIA
Arabidopsis Description
CXXS1Thioredoxin-like protein CXXS1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDI5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.