Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031769.1-P | Field mustard | cytosol | 86.44 | 80.95 |
| CDY34646 | Canola | cytosol | 86.44 | 80.95 |
| VIT_19s0014g05090.t01 | Wine grape | cytosol | 64.41 | 60.32 |
| Solyc02g079960.2.1 | Tomato | cytosol | 62.71 | 59.2 |
| PGSC0003DMT400055905 | Potato | cytosol | 62.71 | 59.2 |
| KRH22228 | Soybean | cytosol | 58.47 | 56.56 |
| GSMUA_Achr9P30140_001 | Banana | cytosol | 62.71 | 55.22 |
| KRH27111 | Soybean | nucleus | 56.78 | 53.17 |
| KRH25890 | Soybean | nucleus | 51.69 | 48.41 |
| KRH55615 | Soybean | cytosol | 50.0 | 46.83 |
| GSMUA_Achr5P26380_001 | Banana | cytosol | 50.85 | 46.51 |
| KRH33304 | Soybean | cytosol | 49.15 | 46.03 |
| Os04t0629500-01 | Rice | cytosol | 50.85 | 45.11 |
| Zm00001d026368_P001 | Maize | cytosol, extracellular | 46.61 | 42.64 |
| OQU82388 | Sorghum | cytosol | 45.76 | 41.86 |
| HORVU2Hr1G107990.1 | Barley | cytosol | 47.46 | 40.58 |
| TraesCS2A01G480300.1 | Wheat | cytosol | 46.61 | 39.57 |
| TraesCS2D01G479600.1 | Wheat | cytosol | 45.76 | 38.85 |
| TraesCS2B01G505100.1 | Wheat | cytosol | 45.76 | 38.85 |
| AT3G51030.1 | Thale cress | cytosol | 37.29 | 38.6 |
| AT1G45145.1 | Thale cress | cytosol | 36.44 | 36.44 |
| AT1G19730.1 | Thale cress | cytosol | 34.75 | 34.45 |
| AT5G42980.1 | Thale cress | cytosol | 33.05 | 33.05 |
| AT3G08710.1 | Thale cress | cytosol | 37.29 | 31.43 |
| AT1G59730.1 | Thale cress | cytosol | 33.05 | 30.23 |
| AT5G39950.1 | Thale cress | cytosol | 30.51 | 27.07 |
| AT3G56420.2 | Thale cress | mitochondrion | 33.9 | 25.97 |
| AT2G40790.1 | Thale cress | cytosol | 32.2 | 24.68 |
| AT1G69880.1 | Thale cress | plastid | 27.97 | 22.3 |
| AT5G16400.1 | Thale cress | plastid | 21.19 | 13.51 |
| AT3G02730.1 | Thale cress | plastid | 20.34 | 13.48 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | EntrezGene:837696 | UniProt:A0A178WIW7 | ProteinID:AAD37583.1 | ProteinID:AAF16634.1 |
| ProteinID:AEE28748.1 | EMBL:AF144390 | ArrayExpress:AT1G11530 | EnsemblPlantsGene:AT1G11530 | RefSeq:AT1G11530 | TAIR:AT1G11530 |
| RefSeq:AT1G11530-TAIR-G | EnsemblPlants:AT1G11530.1 | TAIR:AT1G11530.1 | Symbol:ATCXXS1 | EMBL:AY085990 | Unigene:At.11326 |
| EMBL:BT024568 | GO:GO:0003674 | GO:GO:0003756 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006662 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016671 | GO:GO:0016853 |
| GO:GO:0019725 | GO:GO:0034599 | GO:GO:0045454 | GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 |
| InterPro:IPR013766 | RefSeq:NP_172620.1 | ProteinID:OAP18206.1 | PFAM:PF00085 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51352 | PANTHER:PTHR10438 |
| PANTHER:PTHR10438:SF242 | UniProt:Q8LDI5 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain |
| UniParc:UPI00000A6D8B | : | : | : | : | : |
Description
CXXS1Thioredoxin-like protein CXXS1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDI5]
Coordinates
chr1:+:3874396..3875484
Molecular Weight (calculated)
13335.1 Da
IEP (calculated)
5.125
GRAVY (calculated)
0.142
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVVKIDSA ESWNFYVSQA KNQNCPIVAH FTALWCIPSV FMNSFFEELA FNYKDALFLI VDVDEVKEVA SQLEVKAMPT FLFLKDGNAM DKLVGANPDE
101: IKKRVDGFVQ SSRVVHIA
101: IKKRVDGFVQ SSRVVHIA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.