Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11645 | Canola | cytosol, plastid | 83.78 | 82.12 |
| CDY38768 | Canola | cytosol, plastid | 83.78 | 82.12 |
| Bra016258.1-P | Field mustard | cytosol | 82.43 | 80.79 |
| CDY23543 | Canola | cytosol | 68.24 | 72.14 |
| Bra003976.1-P | Field mustard | cytosol | 68.24 | 71.63 |
| CDY48387 | Canola | cytosol | 68.24 | 71.63 |
| Bra003977.1-P | Field mustard | cytosol | 71.62 | 71.14 |
| CDY23544 | Canola | cytosol | 70.95 | 70.95 |
| CDY48388 | Canola | cytosol | 70.27 | 70.75 |
| AT1G59730.1 | Thale cress | cytosol | 41.22 | 47.29 |
| KRH69384 | Soybean | cytosol | 39.86 | 46.09 |
| KRH74754 | Soybean | cytosol | 39.19 | 46.03 |
| KRH74753 | Soybean | cytosol | 38.51 | 45.97 |
| PGSC0003DMT400045460 | Potato | cytosol | 20.95 | 45.59 |
| VIT_01s0026g01460.t01 | Wine grape | cytosol | 37.16 | 45.45 |
| KRH69383 | Soybean | cytosol | 37.84 | 44.09 |
| Solyc05g006830.2.1 | Tomato | cytosol, plastid | 38.51 | 42.22 |
| Solyc05g006870.2.1 | Tomato | cytosol | 38.51 | 42.22 |
| PGSC0003DMT400045450 | Potato | cytosol | 37.84 | 41.48 |
| Solyc05g006860.2.1 | Tomato | cytosol | 37.84 | 41.48 |
| KRG99185 | Soybean | cytosol, plastid | 33.11 | 40.5 |
| KRH45834 | Soybean | cytosol, plastid | 32.43 | 39.67 |
| Solyc05g006850.2.1 | Tomato | cytosol | 34.46 | 37.78 |
| Solyc04g005810.2.1 | Tomato | plastid | 33.78 | 37.59 |
| AT5G39950.1 | Thale cress | cytosol | 33.78 | 37.59 |
| AT1G45145.1 | Thale cress | cytosol | 29.73 | 37.29 |
| EER90722 | Sorghum | cytosol | 33.11 | 36.84 |
| Zm00001d034491_P001 | Maize | plastid | 33.11 | 36.84 |
| TraesCS5A01G448200.1 | Wheat | cytosol | 32.43 | 36.64 |
| HORVU5Hr1G107210.1 | Barley | cytosol | 32.43 | 36.64 |
| Os03t0800700-01 | Rice | plastid | 33.11 | 36.57 |
| GSMUA_Achr9P10960_001 | Banana | mitochondrion, plastid | 30.41 | 36.29 |
| KRH69387 | Soybean | plastid | 33.78 | 36.23 |
| AT1G19730.1 | Thale cress | cytosol | 29.05 | 36.13 |
| TraesCS5D01G454800.1 | Wheat | cytosol | 31.76 | 35.88 |
| TraesCS5B01G452700.1 | Wheat | cytosol, golgi, unclear | 31.76 | 35.88 |
| AT5G42980.1 | Thale cress | cytosol | 28.38 | 35.59 |
| KRH74748 | Soybean | plastid | 33.11 | 35.51 |
| Os07t0190800-01 | Rice | cytosol | 32.43 | 34.78 |
| GSMUA_Achr2P17710_001 | Banana | cytosol | 29.73 | 34.65 |
| CDY11641 | Canola | plastid | 46.62 | 33.33 |
| AT3G51030.1 | Thale cress | cytosol | 25.68 | 33.33 |
| HORVU5Hr1G107170.1 | Barley | cytosol | 32.43 | 33.1 |
| GSMUA_Achr7P16980_001 | Banana | cytosol | 20.27 | 29.13 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 22.3 | 28.45 |
| AT1G11530.1 | Thale cress | cytosol | 22.3 | 27.97 |
| AT2G40790.1 | Thale cress | cytosol | 27.7 | 26.62 |
| AT3G08710.1 | Thale cress | cytosol | 23.65 | 25.0 |
| AT3G56420.2 | Thale cress | mitochondrion | 25.68 | 24.68 |
| HORVU6Hr1G018190.1 | Barley | mitochondrion | 13.51 | 21.51 |
| AT3G02730.1 | Thale cress | plastid | 23.65 | 19.66 |
| AT5G16400.1 | Thale cress | plastid | 22.3 | 17.84 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | EntrezGene:843324 | ProteinID:AAG52561.1 | ProteinID:AEE34994.1 | EMBL:AK117825 |
| ArrayExpress:AT1G69880 | EnsemblPlantsGene:AT1G69880 | RefSeq:AT1G69880 | TAIR:AT1G69880 | RefSeq:AT1G69880-TAIR-G | EnsemblPlants:AT1G69880.1 |
| TAIR:AT1G69880.1 | Symbol:ATH8 | EMBL:BT003670 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006662 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016671 | GO:GO:0019725 |
| GO:GO:0034599 | GO:GO:0045454 | GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 |
| RefSeq:NP_177146.1 | PFAM:PF00085 | PIRSF:PIRSF000077 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0001054 | PO:PO:0001185 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009046 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF243 | UniProt:Q9CAS1 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI000000C0F3 | : |
Description
TRX8Thioredoxin H8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAS1]
Coordinates
chr1:+:26321398..26323002
Molecular Weight (calculated)
17251.1 Da
IEP (calculated)
9.198
GRAVY (calculated)
-0.268
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MGANVSTPDQ RFQVTHFRST KPWTPRPEIY PFKVNSPCIV EIKNMNQWKS RLNALKDTNK LLVIEFTAKW CGPCKTLEPK LEELAAKYTD VEFVKIDVDV
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.