Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39355 | Canola | cytosol | 87.39 | 87.39 |
| CDY29406 | Canola | cytosol | 85.71 | 85.71 |
| Bra025762.1-P | Field mustard | cytosol | 85.71 | 85.71 |
| AT5G42980.1 | Thale cress | cytosol | 61.34 | 61.86 |
| AT1G45145.1 | Thale cress | cytosol | 59.66 | 60.17 |
| AT3G51030.1 | Thale cress | cytosol | 56.3 | 58.77 |
| HORVU1Hr1G075560.1 | Barley | cytosol | 55.46 | 54.1 |
| TraesCS1D01G327500.1 | Wheat | cytosol, plastid | 53.78 | 53.78 |
| TraesCS1B01G339000.1 | Wheat | cytosol | 52.94 | 53.39 |
| TraesCS1B01G338800.1 | Wheat | cytosol, golgi, plastid, unclear | 55.46 | 51.97 |
| TraesCS1A01G325600.1 | Wheat | cytosol | 56.3 | 51.54 |
| OQU78269 | Sorghum | cytosol | 51.26 | 48.41 |
| Zm00001d038652_P003 | Maize | cytosol | 51.26 | 47.66 |
| TraesCS7D01G001000.1 | Wheat | cytosol | 43.7 | 46.02 |
| TraesCS7A01G562100.1 | Wheat | cytosol | 37.82 | 42.45 |
| AT5G39950.1 | Thale cress | cytosol | 43.7 | 39.1 |
| AT1G59730.1 | Thale cress | cytosol | 39.5 | 36.43 |
| AT1G11530.1 | Thale cress | cytosol | 34.45 | 34.75 |
| AT3G08710.1 | Thale cress | cytosol | 37.82 | 32.14 |
| AT3G56420.2 | Thale cress | mitochondrion | 38.66 | 29.87 |
| AT1G69880.1 | Thale cress | plastid | 36.13 | 29.05 |
| AT2G40790.1 | Thale cress | cytosol | 35.29 | 27.27 |
| AT3G02730.1 | Thale cress | plastid | 34.45 | 23.03 |
| AT5G16400.1 | Thale cress | plastid | 33.61 | 21.62 |
Protein Annotations
| MapMan:10.6.1 | MapMan:18.7.2 | Gene3D:3.40.30.10 | EntrezGene:838562 | ProteinID:AAC49355.1 | ProteinID:AAG12565.1 |
| EMBL:AC024609 | ProteinID:AEE29892.1 | EMBL:AK118542 | ArrayExpress:AT1G19730 | EnsemblPlantsGene:AT1G19730 | RefSeq:AT1G19730 |
| TAIR:AT1G19730 | RefSeq:AT1G19730-TAIR-G | EnsemblPlants:AT1G19730.1 | TAIR:AT1G19730.1 | Symbol:ATTRX4 | EMBL:AY088698 |
| Unigene:At.194 | EMBL:BT004710 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006662 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016671 | GO:GO:0019725 |
| GO:GO:0034599 | GO:GO:0045454 | GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 |
| RefSeq:NP_173403.1 | PFAM:PF00085 | PIRSF:PIRSF000077 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF293 | UniProt:Q39239 |
| SUPFAM:SSF52833 | TIGRFAMs:TIGR01068 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain |
| UniParc:UPI0000004202 | EMBL:Z35473 | : | : | : | : |
Description
TRX4Thioredoxin H4 [Source:UniProtKB/Swiss-Prot;Acc:Q39239]
Coordinates
chr1:-:6822847..6824071
Molecular Weight (calculated)
13063.9 Da
IEP (calculated)
5.158
GRAVY (calculated)
0.145
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEEGQVIG CHTNDVWTVQ LDKAKESNKL IVIDFTASWC PPCRMIAPIF NDLAKKFMSS AIFFKVDVDE LQSVAKEFGV EAMPTFVFIK AGEVVDKLVG
101: ANKEDLQAKI VKHTGVTTA
101: ANKEDLQAKI VKHTGVTTA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.