Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023564.1-P | Field mustard | plastid | 83.78 | 82.89 |
| CDY69984 | Canola | plastid | 81.62 | 81.18 |
| AT3G02730.1 | Thale cress | plastid | 77.84 | 80.9 |
| CDY38116 | Canola | plastid | 81.08 | 80.21 |
| KRH00940 | Soybean | nucleus, plastid | 62.16 | 64.25 |
| KRH40285 | Soybean | plastid | 62.16 | 63.54 |
| VIT_04s0023g00740.t01 | Wine grape | plastid | 57.84 | 62.21 |
| Solyc05g056300.2.1 | Tomato | plastid | 56.22 | 57.14 |
| PGSC0003DMT400059966 | Potato | cytosol, extracellular, plastid | 55.68 | 56.59 |
| Zm00001d024835_P001 | Maize | plastid | 54.59 | 56.11 |
| GSMUA_Achr8P01040_001 | Banana | plastid | 54.05 | 55.87 |
| Os01t0913000-01 | Rice | plastid | 55.68 | 55.08 |
| TraesCS3B01G453600.1 | Wheat | plastid | 55.68 | 54.5 |
| TraesCS3A01G418400.1 | Wheat | plastid | 54.59 | 53.44 |
| KXG21303 | Sorghum | plastid | 54.59 | 52.6 |
| Zm00001d010871_P001 | Maize | plastid | 55.68 | 51.24 |
| GSMUA_Achr11P... | Banana | mitochondrion | 36.76 | 42.24 |
| AT3G51030.1 | Thale cress | cytosol | 22.16 | 35.96 |
| AT1G19730.1 | Thale cress | cytosol | 21.62 | 33.61 |
| AT5G42980.1 | Thale cress | cytosol | 18.38 | 28.81 |
| AT1G59730.1 | Thale cress | cytosol | 20.0 | 28.68 |
| AT3G08710.1 | Thale cress | cytosol | 20.54 | 27.14 |
| AT5G39950.1 | Thale cress | cytosol | 18.92 | 26.32 |
| AT1G45145.1 | Thale cress | cytosol | 16.22 | 25.42 |
| AT2G40790.1 | Thale cress | cytosol | 18.92 | 22.73 |
| AT1G69880.1 | Thale cress | plastid | 17.84 | 22.3 |
| AT3G56420.2 | Thale cress | mitochondrion | 18.38 | 22.08 |
| AT1G11530.1 | Thale cress | cytosol | 13.51 | 21.19 |
Protein Annotations
| MapMan:10.5.4 | Gene3D:3.40.30.10 | EntrezGene:831501 | UniProt:A0A178UDV9 | ProteinID:AED92288.1 | EMBL:AF144386 |
| EMBL:AF370356 | ArrayExpress:AT5G16400 | EnsemblPlantsGene:AT5G16400 | RefSeq:AT5G16400 | TAIR:AT5G16400 | RefSeq:AT5G16400-TAIR-G |
| EnsemblPlants:AT5G16400.1 | TAIR:AT5G16400.1 | EMBL:AY059086 | ProteinID:BAB09607.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006662 | GO:GO:0006950 | GO:GO:0008047 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009628 | GO:GO:0009642 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0016671 | GO:GO:0019725 | GO:GO:0030234 | GO:GO:0034599 | GO:GO:0043085 | GO:GO:0045454 |
| GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 | RefSeq:NP_197144.1 | ProteinID:OAO91968.1 |
| PFAM:PF00085 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF258 | UniProt:Q9XFH9 |
| SUPFAM:SSF52833 | Symbol:TRXF2 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain |
| UniParc:UPI00000016EE | : | : | : | : | : |
Description
TRXF2TRXF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDV9]
Coordinates
chr5:-:5363420..5365391
Molecular Weight (calculated)
20000.4 Da
IEP (calculated)
9.070
GRAVY (calculated)
-0.057
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLSLRLAPS PTSFRYSPIT STGAGGFSPV KQHCRIPNSG VATKIGFCSG GGGVLDSGRR IGSCVVRCSL ETVNVTVGQV TEVDKDTFWP IVKAAGDKIV
101: VLDMYTQWCG PCKVIAPKYK ELSEKYQDMV FLKLDCNQDN KPLAKELGIR VVPTFKILKD NKVVKEVTGA KYEDLLAAIE AARSG
101: VLDMYTQWCG PCKVIAPKYK ELSEKYQDMV FLKLDCNQDN KPLAKELGIR VVPTFKILKD NKVVKEVTGA KYEDLLAAIE AARSG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.