Factsheet for GSMUA_Achr11P15150_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P01040_001	Banana	plastid	48.45	43.58
VIT_04s0023g00740.t01	Wine grape	plastid	44.1	41.28
KRH00940	Soybean	nucleus, plastid	45.34	40.78
KRH40285	Soybean	plastid	44.1	39.23
CDY69984	Canola	plastid	44.1	38.17
Bra023564.1-P	Field mustard	plastid	44.1	37.97
CDY38116	Canola	plastid	44.1	37.97
Bra021417.1-P	Field mustard	plastid	42.86	37.91
CDY53739	Canola	plastid	41.61	37.02
AT5G16400.1	Thale cress	plastid	42.24	36.76
AT3G02730.1	Thale cress	plastid	40.37	36.52
TraesCS3A01G418400.1	Wheat	plastid	42.86	36.51
TraesCS3B01G453600.1	Wheat	plastid	42.24	35.98
Os01t0913000-01	Rice	plastid	41.61	35.83
Zm00001d024835_P001	Maize	plastid	39.13	35.0
CDY51539	Canola	plastid	39.13	35.0
KXG21303	Sorghum	plastid	40.99	34.38
Bra040596.1-P	Field mustard	plastid	38.51	34.25
CDY28704	Canola	plastid	37.89	33.89
Zm00001d010871_P001	Maize	plastid	40.99	32.84
PGSC0003DMT400059966	Potato	cytosol, extracellular, plastid	35.4	31.32
Solyc05g056300.2.1	Tomato	plastid	34.78	30.77
GSMUA_Achr4P22400_001	Banana	cytosol, unclear	14.91	21.05
GSMUA_Achr2P17610_001	Banana	cytosol	13.66	19.3
GSMUA_Achr8P01700_001	Banana	cytosol	14.29	16.55
GSMUA_Achr7P12220_001	Banana	cytosol	11.18	15.52
GSMUA_Achr5P27870_001	Banana	cytosol	13.04	14.89
GSMUA_Achr2P17710_001	Banana	cytosol	11.18	14.17
GSMUA_Achr5P26380_001	Banana	cytosol	10.56	13.18
GSMUA_Achr7P16980_001	Banana	cytosol	8.07	12.62
GSMUA_Achr9P30140_001	Banana	cytosol	9.94	11.94
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	11.8	11.52
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	8.7	11.29

Protein Annotations

MapMan:10.5.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006662	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr11G15150_001	EnsemblPlants:GSMUA_Achr11P15150_001	EnsemblPlants:GSMUA_Achr11T15150_001	InterPro:IPR013766
UniProt:M0RSE5	PFAM:PF00085	ScanProsite:PS00194	PANTHER:PTHR10438	PANTHER:PTHR10438:SF258	SUPFAM:SSF52833
InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI000294D5AA	SEG:seg

Description

thioredoxin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G15150_001]

Coordinates

chr11:-:16734127..16736963

Molecular Weight (calculated)

17548.0 Da

IEP (calculated)

9.468

GRAVY (calculated)

-0.122

Length

161 amino acids

Sequence
(BLAST)

001: MMMSFQGRIR SFYSAFCTVS FRSHRHFQLE MALRIAFSAP SIRSPSSSSS CTPSASSLNR SLGCRPQRRS SGGSLGASGA GGRAVAARSS LETAVGQVTE
101: VDRDTFWPLV KAAGDRVVVL DMYTQWCGPC KVMAPKFLGL SEEYLDVTFM KLNCNHENKA C

Best Arabidopsis Sequence Match ( AT5G16400.1 )
(BLAST)

001: MPLSLRLAPS PTSFRYSPIT STGAGGFSPV KQHCRIPNSG VATKIGFCSG GGGVLDSGRR IGSCVVRCSL ETVNVTVGQV TEVDKDTFWP IVKAAGDKIV
101: VLDMYTQWCG PCKVIAPKYK ELSEKYQDMV FLKLDCNQDN KPLAKELGIR VVPTFKILKD NKVVKEVTGA KYEDLLAAIE AARSG

Arabidopsis Description

TRXF2TRXF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDV9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.