Factsheet for Bra023564.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69984	Canola	plastid	94.12	94.62
AT5G16400.1	Thale cress	plastid	82.89	83.78
Bra021417.1-P	Field mustard	plastid	70.05	71.98
Bra040596.1-P	Field mustard	plastid	68.45	70.72
KRH00940	Soybean	nucleus, plastid	57.22	59.78
KRH40285	Soybean	plastid	57.22	59.12
VIT_04s0023g00740.t01	Wine grape	plastid	52.94	57.56
GSMUA_Achr8P01040_001	Banana	plastid	51.87	54.19
Zm00001d024835_P001	Maize	plastid	50.8	52.78
TraesCS3B01G453600.1	Wheat	plastid	51.87	51.32
Os01t0913000-01	Rice	plastid	50.8	50.8
Solyc05g056300.2.1	Tomato	plastid	49.2	50.55
TraesCS3A01G418400.1	Wheat	plastid	50.8	50.26
PGSC0003DMT400059966	Potato	cytosol, extracellular, plastid	48.66	50.0
KXG21303	Sorghum	plastid	50.27	48.96
Zm00001d010871_P001	Maize	plastid	50.8	47.26
GSMUA_Achr11P...	Banana	mitochondrion	37.97	44.1
Bra036839.1-P	Field mustard	cytosol	22.46	36.84
Bra012872.1-P	Field mustard	cytosol	21.93	35.96
Bra027837.1-P	Field mustard	cytosol	22.99	33.59
Bra017898.1-P	Field mustard	cytosol	22.46	32.81
Bra025762.1-P	Field mustard	cytosol	20.32	31.93
Bra028445.1-P	Field mustard	cytosol	21.39	30.08
Bra027469.1-P	Field mustard	cytosol	19.25	29.27
Bra036335.1-P	Field mustard	cytosol	18.18	29.06
Bra014037.1-P	Field mustard	cytosol	17.65	27.97
Bra040318.1-P	Field mustard	cytosol	19.25	27.69
Bra040055.1-P	Field mustard	cytosol	19.25	26.28
Bra016258.1-P	Field mustard	cytosol	20.86	25.83
Bra003977.1-P	Field mustard	cytosol	20.32	25.5
Bra001346.1-P	Field mustard	cytosol	21.93	25.0
Bra031769.1-P	Field mustard	cytosol	16.58	24.6
Bra014691.1-P	Field mustard	cytosol, mitochondrion	17.11	23.88
Bra007245.1-P	Field mustard	plastid	17.65	23.57
Bra003976.1-P	Field mustard	cytosol	17.65	23.4

Protein Annotations

MapMan:10.5.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra023564	EnsemblPlants:Bra023564.1	EnsemblPlants:Bra023564.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006662	GO:GO:0008047	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009628	GO:GO:0009642	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0030234	GO:GO:0043085	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766	UniProt:M4E461
PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF258
SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0002543043

Description

AT5G16400 (E=9e-088) TRXF2, ATF2 | ATF2; enzyme activator

Coordinates

chrA02:-:3948049..3949097

Molecular Weight (calculated)

20119.4 Da

IEP (calculated)

8.673

GRAVY (calculated)

-0.061

Length

187 amino acids

Sequence
(BLAST)

001: MTLSLRIAPS PTSFRYSPAP STPSGVGLRP VKQRCRIPNS GVAAKTGFCS GVGGVLDSGK SISGSCVARC SLETVNVSVG EVTEVDKDTF WPIVKAAGDK
101: LVVLDMYTQW CGPCKVMAPK YKELSEKYQD MVFLKLDCNE ENKPVAQELG IRVVPTFKIL KDNKVIKEVA GAKFDELLSA IEAARSG

Best Arabidopsis Sequence Match ( AT5G16400.1 )
(BLAST)

001: MPLSLRLAPS PTSFRYSPIT STGAGGFSPV KQHCRIPNSG VATKIGFCSG GGGVLDSGRR IGSCVVRCSL ETVNVTVGQV TEVDKDTFWP IVKAAGDKIV
101: VLDMYTQWCG PCKVIAPKYK ELSEKYQDMV FLKLDCNQDN KPLAKELGIR VVPTFKILKD NKVVKEVTGA KYEDLLAAIE AARSG

Arabidopsis Description

TRXF2TRXF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDV9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.