Factsheet for Bra017898.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027837.1-P	Field mustard	cytosol	92.19	92.19
AT1G59730.1	Thale cress	cytosol	85.16	84.5
CDY03743	Canola	extracellular	50.0	74.42
CDY04457	Canola	cytosol	51.56	67.35
Bra040318.1-P	Field mustard	cytosol	44.53	43.85
VIT_01s0026g01460.t01	Wine grape	cytosol	40.62	42.98
KRH74754	Soybean	cytosol	42.19	42.86
KRH74753	Soybean	cytosol	40.62	41.94
Bra016258.1-P	Field mustard	cytosol	49.22	41.72
Solyc05g006870.2.1	Tomato	cytosol	43.75	41.48
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	42.19	41.22
TraesCS5A01G448200.1	Wheat	cytosol	42.19	41.22
TraesCS5D01G454800.1	Wheat	cytosol	42.19	41.22
HORVU5Hr1G107210.1	Barley	cytosol	42.19	41.22
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	39.06	40.32
KRH69383	Soybean	cytosol	39.84	40.16
Solyc05g006830.2.1	Tomato	cytosol, plastid	42.19	40.0
Solyc05g006860.2.1	Tomato	cytosol	42.19	40.0
Zm00001d034491_P001	Maize	plastid	41.41	39.85
Bra028445.1-P	Field mustard	cytosol	41.41	39.85
KRH69384	Soybean	cytosol	39.84	39.84
PGSC0003DMT400045450	Potato	cytosol	41.41	39.26
Os07t0190800-01	Rice	cytosol	42.19	39.13
Solyc04g005810.2.1	Tomato	plastid	40.62	39.1
Bra025762.1-P	Field mustard	cytosol	35.94	38.66
EER90722	Sorghum	cytosol	39.84	38.35
Os03t0800700-01	Rice	plastid	39.84	38.06
KRG99185	Soybean	cytosol, plastid	35.94	38.02
KRH45834	Soybean	cytosol, plastid	35.94	38.02
Bra036839.1-P	Field mustard	cytosol	33.59	37.72
HORVU5Hr1G107170.1	Barley	cytosol	42.19	37.24
GSMUA_Achr7P12220_001	Banana	cytosol	33.59	37.07
Bra003976.1-P	Field mustard	cytosol	40.62	36.88
Bra012872.1-P	Field mustard	cytosol	32.81	36.84
PGSC0003DMT400045460	Potato	cytosol	19.53	36.76
Bra003977.1-P	Field mustard	cytosol	42.19	36.24
GSMUA_Achr2P17710_001	Banana	cytosol	35.94	36.22
Bra027469.1-P	Field mustard	cytosol	34.38	35.77
Bra014037.1-P	Field mustard	cytosol	32.81	35.59
Solyc05g006850.2.1	Tomato	cytosol	37.5	35.56
Bra036335.1-P	Field mustard	cytosol	32.03	35.04
GSMUA_Achr7P16980_001	Banana	cytosol	27.34	33.98
KRH74748	Soybean	plastid	35.94	33.33
KRH69387	Soybean	plastid	35.16	32.61
Bra031769.1-P	Field mustard	cytosol	27.34	27.78
HORVU6Hr1G018190.1	Barley	mitochondrion	19.53	26.88
Bra007245.1-P	Field mustard	plastid	28.91	26.43
Bra014691.1-P	Field mustard	cytosol, mitochondrion	27.34	26.12
Bra040055.1-P	Field mustard	cytosol	27.34	25.55
Bra001346.1-P	Field mustard	cytosol	31.25	24.39
Bra023564.1-P	Field mustard	plastid	32.81	22.46
Bra021417.1-P	Field mustard	plastid	28.91	20.33
Bra040596.1-P	Field mustard	plastid	27.34	19.34

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra017898	EnsemblPlants:Bra017898.1	EnsemblPlants:Bra017898.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766
UniProt:M4DN11	PFAM:PF00085	PIRSF:PIRSF000077	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI0002540DE5	:	:	:	:	:

Description

AT1G59730 (E=5e-057) ATH7 | ATH7 (thioredoxin H-type 7)

Coordinates

chrA03:-:31472604..31473209

Molecular Weight (calculated)

14543.6 Da

IEP (calculated)

8.720

GRAVY (calculated)

-0.182

Length

128 amino acids

Sequence
(BLAST)

001: MGSNVSSVHD VPSSVENKNG LVVEIESRRQ WRSVFDSMKV SNKLLVIDFT AAWCGPCKAM EPRVKEIVYR FPEAVFARVD VDRLMDVAGT YRANTLPAFV
101: FLKRGEEIDR VVGAKPDELV YKIEKHRV

Best Arabidopsis Sequence Match ( AT1G59730.1 )
(BLAST)

001: MGSNVSSVHD VHSSMEITSN GFVVEIESRR QWKSLFDSMK GSNKLLVIDF TAVWCGPCKA MEPRVREIAS KYSEAVFARV DVDRLMDVAG TYRAITLPAF
101: VFVKRGEEID RVVGAKPDEL VKKIEQHRV

Arabidopsis Description

TRX7Thioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178WRN3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.