CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74748	Soybean	plastid	93.48	93.48
KRG99185	Soybean	cytosol, plastid	59.42	67.77
KRH45834	Soybean	cytosol, plastid	59.42	67.77
KRH69384	Soybean	cytosol	57.25	61.72
KRH69383	Soybean	cytosol	56.52	61.42
KRH74754	Soybean	cytosol	55.8	61.11
KRH74753	Soybean	cytosol	53.62	59.68
VIT_01s0026g01460.t01	Wine grape	cytosol	47.1	53.72
PGSC0003DMT400045460	Potato	cytosol	25.36	51.47
Solyc05g006860.2.1	Tomato	cytosol	46.38	47.41
Solyc05g006830.2.1	Tomato	cytosol, plastid	45.65	46.67
Solyc05g006870.2.1	Tomato	cytosol	45.65	46.67
PGSC0003DMT400045450	Potato	cytosol	44.2	45.19
KRH40138	Soybean	cytosol, plastid	40.58	44.8
KRH01124	Soybean	endoplasmic reticulum	42.75	44.36
Solyc04g005810.2.1	Tomato	plastid	42.03	43.61
KRH40137	Soybean	endoplasmic reticulum	41.3	43.51
KRH76717	Soybean	endoplasmic reticulum, nucleus	36.96	42.5
KRH51778	Soybean	endoplasmic reticulum	35.51	41.88
Solyc05g006850.2.1	Tomato	cytosol	40.58	41.48
KRH28739	Soybean	cytosol	35.51	40.83
KRH01123	Soybean	cytosol	36.23	40.65
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	36.23	40.32
TraesCS5A01G448200.1	Wheat	cytosol	37.68	39.69
HORVU5Hr1G107210.1	Barley	cytosol	37.68	39.69
KRH15131	Soybean	cytosol, nucleus	34.06	39.5
GSMUA_Achr2P17710_001	Banana	cytosol	36.23	39.37
EER90722	Sorghum	cytosol	37.68	39.1
TraesCS5D01G454800.1	Wheat	cytosol	36.96	38.93
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	36.96	38.93
KRH40136	Soybean	endoplasmic reticulum	44.2	38.85
Os03t0800700-01	Rice	plastid	37.68	38.81
Os07t0190800-01	Rice	cytosol	38.41	38.41
KRH61100	Soybean	cytosol	31.88	37.61
Zm00001d034491_P001	Maize	plastid	36.23	37.59
AT1G59730.1	Thale cress	cytosol	34.78	37.21
CDY45144	Canola	cytosol	33.33	35.94
Bra027837.1-P	Field mustard	cytosol	33.33	35.94
CDY30901	Canola	cytosol	33.33	35.94
CDY27290	Canola	cytosol	33.33	35.94
HORVU5Hr1G107170.1	Barley	cytosol	37.68	35.86
Bra017898.1-P	Field mustard	cytosol	32.61	35.16
GSMUA_Achr7P16980_001	Banana	cytosol	26.09	34.95
KRH01119	Soybean	cytosol	34.78	34.29
KRH05879	Soybean	endoplasmic reticulum	30.43	34.15
AT1G69880.1	Thale cress	plastid	36.23	33.78
CDY11645	Canola	cytosol, plastid	36.96	33.77
CDY38768	Canola	cytosol, plastid	36.96	33.77
Bra016258.1-P	Field mustard	cytosol	36.96	33.77
CDY23544	Canola	cytosol	35.51	33.11
KRH10686	Soybean	cytosol	28.99	32.26
Bra003977.1-P	Field mustard	cytosol	34.06	31.54
CDY23543	Canola	cytosol	31.88	31.43
CDY48388	Canola	cytosol	33.33	31.29
CDY48387	Canola	cytosol	31.88	31.21
Bra003976.1-P	Field mustard	cytosol	31.88	31.21
KRH21649	Soybean	cytosol, plastid	28.26	31.2
CDY03743	Canola	extracellular	17.39	27.91
KRH22228	Soybean	cytosol	23.91	27.05
KRH25890	Soybean	nucleus	24.64	26.98
HORVU6Hr1G018190.1	Barley	mitochondrion	18.12	26.88
KRH27111	Soybean	nucleus	23.91	26.19
GSMUA_Achr7P12220_001	Banana	cytosol	21.74	25.86
KRH09556	Soybean	cytosol	25.36	25.55
KRH33304	Soybean	cytosol	23.19	25.4
KRH55615	Soybean	cytosol	23.19	25.4
KRH00477	Soybean	cytosol	25.36	25.18
CDY04457	Canola	cytosol	16.67	23.47
KRH64869	Soybean	cytosol	25.36	22.88
KRH40706	Soybean	mitochondrion	26.09	21.3
KRH00940	Soybean	nucleus, plastid	25.36	19.55
KRH40285	Soybean	plastid	25.36	19.34
CDY11641	Canola	plastid	20.29	13.53

Protein Annotations

MapMan:10.6.1	EntrezGene:100776312	Gene3D:3.40.30.10	EMBL:ACUP02000705	EMBL:BT096321	UniProt:C6TFD4
EnsemblPlantsGene:GLYMA_02G023400	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006662	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0016671	GO:GO:0019725	GO:GO:0034599	GO:GO:0045454
GO:GO:0047134	GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766	EnsemblPlants:KRH69387	ProteinID:KRH69387
ProteinID:KRH69387.1	PFAM:PF00085	PIRSF:PIRSF000077	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI0001B16612	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:2119432..2120808

Molecular Weight (calculated)

15693.8 Da

IEP (calculated)

8.687

GRAVY (calculated)

-0.276

Length

138 amino acids

Sequence
(BLAST)

001: MAPTIYNFSY SKRFSESFNS STSKKESSSS NILAFHSIAQ WNAHYKATKE TNKLMVLDFT ATWCGPCKLM DPVILEFAGN YTDVEFIKID VEELTEVSQA
101: LQVHQLPTFV LVQKGKVADR VVGVKKEELK RSIEKHIK

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.