CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 2
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69383	Soybean	cytosol	94.44	93.7
KRH74753	Soybean	cytosol	79.37	80.65
KRH69384	Soybean	cytosol	80.95	79.69
KRH45834	Soybean	cytosol, plastid	68.25	71.07
KRG99185	Soybean	cytosol, plastid	67.46	70.25
VIT_01s0026g01460.t01	Wine grape	cytosol	64.29	66.94
PGSC0003DMT400045460	Potato	cytosol	34.13	63.24
PGSC0003DMT400045450	Potato	cytosol	65.87	61.48
Solyc05g006870.2.1	Tomato	cytosol	65.08	60.74
Solyc05g006830.2.1	Tomato	cytosol, plastid	65.08	60.74
KRH74748	Soybean	plastid	63.49	57.97
Solyc05g006860.2.1	Tomato	cytosol	61.9	57.78
KRH69387	Soybean	plastid	61.11	55.8
KRH01124	Soybean	endoplasmic reticulum	57.14	54.14
Solyc04g005810.2.1	Tomato	plastid	56.35	53.38
KRH40137	Soybean	endoplasmic reticulum	54.76	52.67
Solyc05g006850.2.1	Tomato	cytosol	56.35	52.59
KRH40138	Soybean	cytosol, plastid	50.79	51.2
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	49.21	50.0
KRH01123	Soybean	cytosol	48.41	49.59
KRH51778	Soybean	endoplasmic reticulum	44.44	47.86
KRH40136	Soybean	endoplasmic reticulum	59.52	47.77
Os07t0190800-01	Rice	cytosol	51.59	47.1
Os03t0800700-01	Rice	plastid	49.21	46.27
GSMUA_Achr2P17710_001	Banana	cytosol	46.03	45.67
HORVU5Hr1G107210.1	Barley	cytosol	46.83	45.04
TraesCS5A01G448200.1	Wheat	cytosol	46.83	45.04
KRH61100	Soybean	cytosol	41.27	44.44
Zm00001d034491_P001	Maize	plastid	46.83	44.36
TraesCS5D01G454800.1	Wheat	cytosol	46.03	44.27
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	46.03	44.27
AT1G59730.1	Thale cress	cytosol	45.24	44.19
KRH15131	Soybean	cytosol, nucleus	41.27	43.7
KRH76717	Soybean	endoplasmic reticulum, nucleus	41.27	43.33
KRH28739	Soybean	cytosol	41.27	43.33
CDY27290	Canola	cytosol	43.65	42.97
EER90722	Sorghum	cytosol	45.24	42.86
Bra017898.1-P	Field mustard	cytosol	42.86	42.19
Bra027837.1-P	Field mustard	cytosol	42.86	42.19
CDY30901	Canola	cytosol	42.86	42.19
CDY45144	Canola	cytosol	42.86	42.19
GSMUA_Achr7P16980_001	Banana	cytosol	34.13	41.75
HORVU5Hr1G107170.1	Barley	cytosol	46.83	40.69
KRH05879	Soybean	endoplasmic reticulum	39.68	40.65
KRH01119	Soybean	cytosol	44.44	40.0
AT1G69880.1	Thale cress	plastid	46.03	39.19
KRH21649	Soybean	cytosol, plastid	38.1	38.4
KRH10686	Soybean	cytosol	37.3	37.9
CDY23543	Canola	cytosol	41.27	37.14
Bra003976.1-P	Field mustard	cytosol	41.27	36.88
CDY48387	Canola	cytosol	41.27	36.88
CDY23544	Canola	cytosol	42.86	36.49
Bra016258.1-P	Field mustard	cytosol	43.65	36.42
CDY11645	Canola	cytosol, plastid	43.65	36.42
CDY38768	Canola	cytosol, plastid	43.65	36.42
Bra003977.1-P	Field mustard	cytosol	42.86	36.24
CDY48388	Canola	cytosol	42.06	36.05
GSMUA_Achr7P12220_001	Banana	cytosol	30.95	33.62
KRH22228	Soybean	cytosol	32.54	33.61
KRH27111	Soybean	nucleus	32.54	32.54
KRH09556	Soybean	cytosol	34.92	32.12
KRH25890	Soybean	nucleus	31.75	31.75
KRH00477	Soybean	cytosol	34.13	30.94
KRH33304	Soybean	cytosol	30.16	30.16
KRH55615	Soybean	cytosol	30.16	30.16
CDY03743	Canola	extracellular	19.84	29.07
HORVU6Hr1G018190.1	Barley	mitochondrion	20.63	27.96
KRH64869	Soybean	cytosol	33.33	27.45
CDY04457	Canola	cytosol	20.63	26.53
KRH40706	Soybean	mitochondrion	33.33	24.85
KRH00940	Soybean	nucleus, plastid	30.95	21.79
KRH40285	Soybean	plastid	30.95	21.55
CDY11641	Canola	plastid	19.05	11.59

Protein Annotations

MapMan:10.6.1	EntrezGene:100527691	Gene3D:3.40.30.10	EMBL:ACUP02000066	EMBL:BT092555	UniProt:C6T543
EnsemblPlantsGene:GLYMA_01G041200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006662	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0016671	GO:GO:0019725	GO:GO:0034599	GO:GO:0045454
GO:GO:0047134	GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766	EnsemblPlants:KRH74754	ProteinID:KRH74754
ProteinID:KRH74754.1	PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352
PANTHER:PTHR10438	PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	TIGRFAMs:TIGR01068	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0001B15C97	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:4420529..4421978

Molecular Weight (calculated)

14428.6 Da

IEP (calculated)

8.222

GRAVY (calculated)

-0.157

Length

126 amino acids

Sequence
(BLAST)

001: MGANFSTFEF VEKSSHSSLV LTFHSTAKWK AHFDASKETN KLMVIDFTAT WCGPCKYMDP IIKEFAAKYT DVEFIKIDVD ELMEVAEAFQ VQAMPTFILI
101: KKGKVVEKVV GAKKEELQKL IEKRRN

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.