Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH01123 | Soybean | cytosol | 69.6 | 70.73 |
| KRH40137 | Soybean | endoplasmic reticulum | 69.6 | 66.41 |
| KRH01124 | Soybean | endoplasmic reticulum | 57.6 | 54.14 |
| KRH74753 | Soybean | cytosol | 52.0 | 52.42 |
| KRH01119 | Soybean | cytosol | 58.4 | 52.14 |
| KRH74754 | Soybean | cytosol | 51.2 | 50.79 |
| CDY65333 | Canola | cytosol | 53.6 | 50.38 |
| PGSC0003DMT400003564 | Potato | plastid | 56.8 | 50.0 |
| KRH69384 | Soybean | cytosol | 51.2 | 50.0 |
| Bra028445.1-P | Field mustard | cytosol | 52.8 | 49.62 |
| TraesCS5A01G448200.1 | Wheat | cytosol | 52.0 | 49.62 |
| TraesCS5B01G452700.1 | Wheat | cytosol, golgi, unclear | 52.0 | 49.62 |
| HORVU5Hr1G107210.1 | Barley | cytosol | 52.0 | 49.62 |
| TraesCS5D01G454800.1 | Wheat | cytosol | 52.0 | 49.62 |
| CDX67442 | Canola | cytosol | 52.8 | 49.25 |
| KRH69383 | Soybean | cytosol | 49.6 | 48.82 |
| Bra040318.1-P | Field mustard | cytosol | 50.4 | 48.46 |
| Zm00001d034491_P001 | Maize | plastid | 51.2 | 48.12 |
| VIT_14s0066g02560.t01 | Wine grape | cytosol | 52.0 | 47.79 |
| Os03t0800700-01 | Rice | plastid | 51.2 | 47.76 |
| EER90722 | Sorghum | cytosol | 50.4 | 47.37 |
| GSMUA_Achr9P10960_001 | Banana | mitochondrion, plastid | 46.4 | 46.77 |
| KRH51778 | Soybean | endoplasmic reticulum | 43.2 | 46.15 |
| AT5G39950.1 | Thale cress | cytosol | 48.8 | 45.86 |
| KRH40136 | Soybean | endoplasmic reticulum | 57.6 | 45.86 |
| GSMUA_Achr2P17710_001 | Banana | cytosol | 46.4 | 45.67 |
| HORVU5Hr1G107170.1 | Barley | cytosol | 52.0 | 44.83 |
| KRG99185 | Soybean | cytosol, plastid | 43.2 | 44.63 |
| KRH45834 | Soybean | cytosol, plastid | 43.2 | 44.63 |
| KRH76717 | Soybean | endoplasmic reticulum, nucleus | 42.4 | 44.17 |
| KRH15131 | Soybean | cytosol, nucleus | 41.6 | 43.7 |
| KRH61100 | Soybean | cytosol | 40.8 | 43.59 |
| GSMUA_Achr7P16980_001 | Banana | cytosol | 35.2 | 42.72 |
| KRH28739 | Soybean | cytosol | 40.0 | 41.67 |
| Os07t0190800-01 | Rice | cytosol | 45.6 | 41.3 |
| KRH05879 | Soybean | endoplasmic reticulum | 40.0 | 40.65 |
| KRH69387 | Soybean | plastid | 44.8 | 40.58 |
| KRH74748 | Soybean | plastid | 44.0 | 39.86 |
| CDY57101 | Canola | cytosol | 50.4 | 38.18 |
| Solyc02g087630.2.1 | Tomato | plastid | 48.8 | 36.09 |
| KRH10686 | Soybean | cytosol | 34.4 | 34.68 |
| CDY37032 | Canola | cytosol | 50.4 | 33.69 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 31.2 | 33.62 |
| KRH21649 | Soybean | cytosol, plastid | 32.8 | 32.8 |
| KRH09556 | Soybean | cytosol | 34.4 | 31.39 |
| KRH22228 | Soybean | cytosol | 29.6 | 30.33 |
| KRH25890 | Soybean | nucleus | 29.6 | 29.37 |
| KRH00477 | Soybean | cytosol | 32.0 | 28.78 |
| KRH27111 | Soybean | nucleus | 28.8 | 28.57 |
| HORVU6Hr1G018190.1 | Barley | mitochondrion | 20.8 | 27.96 |
| KRH55615 | Soybean | cytosol | 28.0 | 27.78 |
| KRH64869 | Soybean | cytosol | 33.6 | 27.45 |
| KRH33304 | Soybean | cytosol | 27.2 | 26.98 |
| KRH40706 | Soybean | mitochondrion | 31.2 | 23.08 |
| KRH40285 | Soybean | plastid | 29.6 | 20.44 |
| KRH00940 | Soybean | nucleus, plastid | 28.8 | 20.11 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | EMBL:ACUP02006021 | EnsemblPlantsGene:GLYMA_09G241000 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006662 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016671 |
| GO:GO:0019725 | GO:GO:0034599 | GO:GO:0045454 | GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 |
| InterPro:IPR013766 | UniProt:K7LFS6 | EnsemblPlants:KRH40138 | ProteinID:KRH40138 | ProteinID:KRH40138.1 | PFAM:PF00085 |
| PIRSF:PIRSF000077 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF278 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI00023385E5 | : |
Description
hypothetical protein
Coordinates
chr9:+:46326749..46327392
Molecular Weight (calculated)
14367.2 Da
IEP (calculated)
6.350
GRAVY (calculated)
-0.270
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSYFSSISA TVVEAENPHV RAFHSAESWQ THFKQIKDSP KLLHFTVSWC PPCKFIAPLF NEMAAMFTDA EFIKIDVDEL SDVAKEFKVE AMPTFVLWKK
101: GKEVDRVVGA EKDELKNKIE KHYQL
101: GKEVDRVVGA EKDELKNKIE KHYQL
001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
Arabidopsis Description
TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.