Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65333 | Canola | cytosol | 83.46 | 83.46 |
| Bra028445.1-P | Field mustard | cytosol | 81.95 | 81.95 |
| CDX67442 | Canola | cytosol | 81.95 | 81.34 |
| KRH01124 | Soybean | endoplasmic reticulum | 68.42 | 68.42 |
| Bra040318.1-P | Field mustard | cytosol | 64.66 | 66.15 |
| VIT_14s0066g02560.t01 | Wine grape | cytosol | 62.41 | 61.03 |
| PGSC0003DMT400003564 | Potato | plastid | 64.66 | 60.56 |
| KRH40136 | Soybean | endoplasmic reticulum | 69.17 | 58.6 |
| KRH40137 | Soybean | endoplasmic reticulum | 55.64 | 56.49 |
| KRH01123 | Soybean | cytosol | 48.12 | 52.03 |
| CDY57101 | Canola | cytosol | 62.41 | 50.3 |
| TraesCS5B01G452700.1 | Wheat | cytosol, golgi, unclear | 48.87 | 49.62 |
| TraesCS5D01G454800.1 | Wheat | cytosol | 48.87 | 49.62 |
| HORVU5Hr1G107210.1 | Barley | cytosol | 48.87 | 49.62 |
| TraesCS5A01G448200.1 | Wheat | cytosol | 48.12 | 48.85 |
| KRH40138 | Soybean | cytosol, plastid | 45.86 | 48.8 |
| Os03t0800700-01 | Rice | plastid | 48.87 | 48.51 |
| Zm00001d034491_P001 | Maize | plastid | 48.12 | 48.12 |
| GSMUA_Achr2P17710_001 | Banana | cytosol | 45.86 | 48.03 |
| Os07t0190800-01 | Rice | cytosol | 48.87 | 47.1 |
| Solyc02g087630.2.1 | Tomato | plastid | 59.4 | 46.75 |
| CDY37032 | Canola | cytosol | 64.66 | 45.99 |
| EER90722 | Sorghum | cytosol | 45.86 | 45.86 |
| AT1G45145.1 | Thale cress | cytosol | 40.6 | 45.76 |
| GSMUA_Achr9P10960_001 | Banana | mitochondrion, plastid | 42.11 | 45.16 |
| HORVU5Hr1G107170.1 | Barley | cytosol | 48.87 | 44.83 |
| AT1G19730.1 | Thale cress | cytosol | 39.1 | 43.7 |
| KRH01119 | Soybean | cytosol | 45.86 | 43.57 |
| AT3G51030.1 | Thale cress | cytosol | 36.84 | 42.98 |
| AT1G59730.1 | Thale cress | cytosol | 41.35 | 42.64 |
| GSMUA_Achr7P16980_001 | Banana | cytosol | 32.33 | 41.75 |
| AT5G42980.1 | Thale cress | cytosol | 35.34 | 39.83 |
| AT1G69880.1 | Thale cress | plastid | 37.59 | 33.78 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 28.57 | 32.76 |
| HORVU6Hr1G018190.1 | Barley | mitochondrion | 22.56 | 32.26 |
| AT1G11530.1 | Thale cress | cytosol | 27.07 | 30.51 |
| AT3G56420.2 | Thale cress | mitochondrion | 33.08 | 28.57 |
| AT3G08710.1 | Thale cress | cytosol | 30.08 | 28.57 |
| AT2G40790.1 | Thale cress | cytosol | 31.58 | 27.27 |
| AT3G02730.1 | Thale cress | plastid | 27.82 | 20.79 |
| AT5G16400.1 | Thale cress | plastid | 26.32 | 18.92 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | EntrezGene:833992 | ProteinID:AAC49353.1 | ProteinID:AED94495.1 | ArrayExpress:AT5G39950 |
| EnsemblPlantsGene:AT5G39950 | RefSeq:AT5G39950 | TAIR:AT5G39950 | RefSeq:AT5G39950-TAIR-G | EnsemblPlants:AT5G39950.1 | TAIR:AT5G39950.1 |
| Symbol:ATTRX2 | EMBL:AY048235 | EMBL:AY113052 | Unigene:At.10806 | ProteinID:BAB10219.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006662 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016020 | GO:GO:0016671 | GO:GO:0019725 |
| GO:GO:0034599 | GO:GO:0045454 | GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 |
| RefSeq:NP_198811.1 | PFAM:PF00085 | PIRSF:PIRSF000077 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF243 |
| UniProt:Q38879 | SUPFAM:SSF52833 | TIGRFAMs:TIGR01068 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS |
| InterPro:Thioredoxin_domain | UniParc:UPI0000000BAD | EMBL:Z35475 | : | : | : |
Description
TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
Coordinates
chr5:-:15990687..15991978
Molecular Weight (calculated)
14676.6 Da
IEP (calculated)
5.810
GRAVY (calculated)
-0.200
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.