Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77974 | Canola | cytosol | 91.23 | 91.23 |
| CDX90669 | Canola | cytosol | 90.35 | 90.35 |
| Bra036839.1-P | Field mustard | cytosol | 90.35 | 90.35 |
| Bra012872.1-P | Field mustard | cytosol | 90.35 | 90.35 |
| CDY28996 | Canola | cytosol | 89.47 | 89.47 |
| CDY34470 | Canola | cytosol | 43.86 | 86.21 |
| KRH76717 | Soybean | endoplasmic reticulum, nucleus | 78.95 | 75.0 |
| KRH28739 | Soybean | cytosol | 76.32 | 72.5 |
| VIT_04s0023g02700.t01 | Wine grape | cytosol | 72.81 | 72.17 |
| PGSC0003DMT400009306 | Potato | cytosol | 71.93 | 69.49 |
| Solyc02g084710.2.1 | Tomato | extracellular | 71.05 | 68.64 |
| GSMUA_Achr4P22400_001 | Banana | cytosol, unclear | 68.42 | 68.42 |
| VIT_18s0001g13250.t01 | Wine grape | cytosol | 65.79 | 65.79 |
| AT5G42980.1 | Thale cress | cytosol | 62.28 | 60.17 |
| AT1G45145.1 | Thale cress | cytosol | 61.4 | 59.32 |
| GSMUA_Achr2P17610_001 | Banana | cytosol | 58.77 | 58.77 |
| AT1G19730.1 | Thale cress | cytosol | 58.77 | 56.3 |
| CDX73752 | Canola | cytosol, mitochondrion | 91.23 | 47.27 |
| VIT_18s0001g13240.t01 | Wine grape | cytosol | 57.02 | 41.14 |
| AT1G11530.1 | Thale cress | cytosol | 38.6 | 37.29 |
| AT5G39950.1 | Thale cress | cytosol | 42.98 | 36.84 |
| AT3G08710.1 | Thale cress | cytosol | 43.86 | 35.71 |
| AT1G59730.1 | Thale cress | cytosol | 37.72 | 33.33 |
| AT3G56420.2 | Thale cress | mitochondrion | 41.23 | 30.52 |
| AT2G40790.1 | Thale cress | cytosol | 36.84 | 27.27 |
| AT1G69880.1 | Thale cress | plastid | 33.33 | 25.68 |
| AT3G02730.1 | Thale cress | plastid | 37.72 | 24.16 |
| AT5G16400.1 | Thale cress | plastid | 35.96 | 22.16 |
Protein Annotations
| MapMan:10.6.1 | MapMan:18.7.2 | PDB:1XFL | Gene3D:3.40.30.10 | EntrezGene:824267 | UniProt:A0A178VFN9 |
| ProteinID:AAC49354.1 | ProteinID:AEE78739.1 | ArrayExpress:AT3G51030 | EnsemblPlantsGene:AT3G51030 | RefSeq:AT3G51030 | TAIR:AT3G51030 |
| RefSeq:AT3G51030-TAIR-G | EnsemblPlants:AT3G51030.1 | TAIR:AT3G51030.1 | Symbol:ATTRX1 | EMBL:AY088687 | ProteinID:CAB62625.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006662 |
| GO:GO:0006950 | GO:GO:0008047 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0016671 | GO:GO:0019725 | GO:GO:0030234 | GO:GO:0034599 | GO:GO:0043085 | GO:GO:0045454 |
| GO:GO:0047134 | GO:GO:0048046 | GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 | RefSeq:NP_190672.1 |
| ProteinID:OAP04656.1 | UniProt:P29448 | PFAM:PF00085 | PIRSF:PIRSF000077 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 |
| PANTHER:PTHR10438 | PANTHER:PTHR10438:SF370 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS |
| InterPro:Thioredoxin_domain | UniParc:UPI0000001455 | EMBL:Z14084 | : | : | : |
Description
TRX1Thioredoxin H1 [Source:UniProtKB/Swiss-Prot;Acc:P29448]
Coordinates
chr3:-:18950918..18952109
Molecular Weight (calculated)
12673.4 Da
IEP (calculated)
5.727
GRAVY (calculated)
0.034
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEEGQVIA CHTVETWNEQ LQKANESKTL VVVDFTASWC GPCRFIAPFF ADLAKKLPNV LFLKVDTDEL KSVASDWAIQ AMPTFMFLKE GKILDKVVGA
101: KKDELQSTIA KHLA
101: KKDELQSTIA KHLA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.