Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30901 | Canola | cytosol | 87.6 | 88.28 |
| CDY45144 | Canola | cytosol | 86.82 | 87.5 |
| Bra027837.1-P | Field mustard | cytosol | 86.82 | 87.5 |
| CDY27290 | Canola | cytosol | 84.5 | 85.16 |
| Bra017898.1-P | Field mustard | cytosol | 84.5 | 85.16 |
| CDY03743 | Canola | extracellular | 41.86 | 62.79 |
| CDY04457 | Canola | cytosol | 43.41 | 57.14 |
| VIT_01s0026g01460.t01 | Wine grape | cytosol | 43.41 | 46.28 |
| KRH74753 | Soybean | cytosol | 44.19 | 45.97 |
| KRH74754 | Soybean | cytosol | 44.19 | 45.24 |
| KRH69384 | Soybean | cytosol | 43.41 | 43.75 |
| GSMUA_Achr9P10960_001 | Banana | mitochondrion, plastid | 41.86 | 43.55 |
| Solyc05g006870.2.1 | Tomato | cytosol | 44.96 | 42.96 |
| Solyc04g005810.2.1 | Tomato | plastid | 44.19 | 42.86 |
| KRH69383 | Soybean | cytosol | 41.86 | 42.52 |
| Solyc05g006830.2.1 | Tomato | cytosol, plastid | 44.19 | 42.22 |
| KRG99185 | Soybean | cytosol, plastid | 39.53 | 42.15 |
| Solyc05g006860.2.1 | Tomato | cytosol | 43.41 | 41.48 |
| PGSC0003DMT400045450 | Potato | cytosol | 43.41 | 41.48 |
| AT5G39950.1 | Thale cress | cytosol | 42.64 | 41.35 |
| KRH45834 | Soybean | cytosol, plastid | 38.76 | 41.32 |
| TraesCS5A01G448200.1 | Wheat | cytosol | 41.86 | 41.22 |
| TraesCS5B01G452700.1 | Wheat | cytosol, golgi, unclear | 41.86 | 41.22 |
| TraesCS5D01G454800.1 | Wheat | cytosol | 41.86 | 41.22 |
| HORVU5Hr1G107210.1 | Barley | cytosol | 41.86 | 41.22 |
| AT1G69880.1 | Thale cress | plastid | 47.29 | 41.22 |
| Zm00001d034491_P001 | Maize | plastid | 41.09 | 39.85 |
| AT1G45145.1 | Thale cress | cytosol | 36.43 | 39.83 |
| PGSC0003DMT400045460 | Potato | cytosol | 20.93 | 39.71 |
| AT1G19730.1 | Thale cress | cytosol | 36.43 | 39.5 |
| Os07t0190800-01 | Rice | cytosol | 41.86 | 39.13 |
| GSMUA_Achr2P17710_001 | Banana | cytosol | 37.98 | 38.58 |
| EER90722 | Sorghum | cytosol | 39.53 | 38.35 |
| AT3G51030.1 | Thale cress | cytosol | 33.33 | 37.72 |
| HORVU5Hr1G107170.1 | Barley | cytosol | 41.86 | 37.24 |
| Os03t0800700-01 | Rice | plastid | 37.98 | 36.57 |
| AT5G42980.1 | Thale cress | cytosol | 33.33 | 36.44 |
| Solyc05g006850.2.1 | Tomato | cytosol | 37.98 | 36.3 |
| KRH74748 | Soybean | plastid | 37.98 | 35.51 |
| GSMUA_Achr7P16980_001 | Banana | cytosol | 27.91 | 34.95 |
| KRH69387 | Soybean | plastid | 37.21 | 34.78 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 31.01 | 34.48 |
| AT1G11530.1 | Thale cress | cytosol | 30.23 | 33.05 |
| AT3G08710.1 | Thale cress | cytosol | 33.33 | 30.71 |
| AT3G56420.2 | Thale cress | mitochondrion | 31.01 | 25.97 |
| HORVU6Hr1G018190.1 | Barley | mitochondrion | 17.83 | 24.73 |
| AT2G40790.1 | Thale cress | cytosol | 27.91 | 23.38 |
| AT3G02730.1 | Thale cress | plastid | 31.78 | 23.03 |
| AT5G16400.1 | Thale cress | plastid | 28.68 | 20.0 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | EntrezGene:842266 | UniProt:A0A178WRN3 | ProteinID:AAD39316.1 | ProteinID:AEE33610.1 |
| EMBL:AK228099 | ArrayExpress:AT1G59730 | EnsemblPlantsGene:AT1G59730 | RefSeq:AT1G59730 | TAIR:AT1G59730 | RefSeq:AT1G59730-TAIR-G |
| EnsemblPlants:AT1G59730.1 | TAIR:AT1G59730.1 | Symbol:ATH7 | Unigene:At.36796 | EMBL:BT003140 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006662 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0016671 | GO:GO:0019725 | GO:GO:0034599 | GO:GO:0045454 | GO:GO:0047134 | GO:GO:0055114 |
| GO:GO:0098869 | InterPro:IPR013766 | RefSeq:NP_176182.1 | ProteinID:OAP19862.1 | PFAM:PF00085 | PIRSF:PIRSF000077 |
| PO:PO:0000084 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025281 | ScanProsite:PS00194 | PFscan:PS51352 |
| PANTHER:PTHR10438 | PANTHER:PTHR10438:SF278 | UniProt:Q9XIF4 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI000000BF0A | SEG:seg | : | : |
Description
TRX7Thioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178WRN3]
Coordinates
chr1:-:21952597..21953480
Molecular Weight (calculated)
14532.6 Da
IEP (calculated)
8.234
GRAVY (calculated)
-0.146
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNVSSVHD VHSSMEITSN GFVVEIESRR QWKSLFDSMK GSNKLLVIDF TAVWCGPCKA MEPRVREIAS KYSEAVFARV DVDRLMDVAG TYRAITLPAF
101: VFVKRGEEID RVVGAKPDEL VKKIEQHRV
101: VFVKRGEEID RVVGAKPDEL VKKIEQHRV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.