Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45144 | Canola | cytosol | 98.44 | 98.44 |
| CDY27290 | Canola | cytosol | 92.97 | 92.97 |
| AT1G59730.1 | Thale cress | cytosol | 88.28 | 87.6 |
| CDY03743 | Canola | extracellular | 46.88 | 69.77 |
| CDY04457 | Canola | cytosol | 48.44 | 63.27 |
| VIT_01s0026g01460.t01 | Wine grape | cytosol | 40.62 | 42.98 |
| KRH74754 | Soybean | cytosol | 42.19 | 42.86 |
| KRH74753 | Soybean | cytosol | 40.62 | 41.94 |
| CDY38768 | Canola | cytosol, plastid | 49.22 | 41.72 |
| Solyc05g006870.2.1 | Tomato | cytosol | 43.75 | 41.48 |
| TraesCS5A01G448200.1 | Wheat | cytosol | 42.19 | 41.22 |
| TraesCS5B01G452700.1 | Wheat | cytosol, golgi, unclear | 42.19 | 41.22 |
| TraesCS5D01G454800.1 | Wheat | cytosol | 42.19 | 41.22 |
| HORVU5Hr1G107210.1 | Barley | cytosol | 42.19 | 41.22 |
| GSMUA_Achr9P10960_001 | Banana | mitochondrion, plastid | 39.84 | 41.13 |
| CDY11645 | Canola | cytosol, plastid | 48.44 | 41.06 |
| KRH69383 | Soybean | cytosol | 39.84 | 40.16 |
| Solyc05g006860.2.1 | Tomato | cytosol | 42.19 | 40.0 |
| Solyc05g006830.2.1 | Tomato | cytosol, plastid | 42.19 | 40.0 |
| Solyc04g005810.2.1 | Tomato | plastid | 41.41 | 39.85 |
| Zm00001d034491_P001 | Maize | plastid | 41.41 | 39.85 |
| KRH69384 | Soybean | cytosol | 39.84 | 39.84 |
| PGSC0003DMT400045450 | Potato | cytosol | 41.41 | 39.26 |
| CDY65333 | Canola | cytosol | 40.62 | 39.1 |
| CDX67442 | Canola | cytosol | 40.62 | 38.81 |
| CDY23543 | Canola | cytosol | 42.19 | 38.57 |
| Os07t0190800-01 | Rice | cytosol | 41.41 | 38.41 |
| EER90722 | Sorghum | cytosol | 39.84 | 38.35 |
| CDY48387 | Canola | cytosol | 42.19 | 38.3 |
| KRG99185 | Soybean | cytosol, plastid | 35.94 | 38.02 |
| CDY48388 | Canola | cytosol | 42.97 | 37.41 |
| HORVU5Hr1G107170.1 | Barley | cytosol | 42.19 | 37.24 |
| KRH45834 | Soybean | cytosol, plastid | 35.16 | 37.19 |
| GSMUA_Achr2P17710_001 | Banana | cytosol | 36.72 | 37.01 |
| CDY29406 | Canola | cytosol | 34.38 | 36.97 |
| CDY39355 | Canola | cytosol | 34.38 | 36.97 |
| CDY28996 | Canola | cytosol | 32.81 | 36.84 |
| CDX77974 | Canola | cytosol | 32.81 | 36.84 |
| PGSC0003DMT400045460 | Potato | cytosol | 19.53 | 36.76 |
| Os03t0800700-01 | Rice | plastid | 38.28 | 36.57 |
| CDY23544 | Canola | cytosol | 42.19 | 36.49 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 32.81 | 36.21 |
| CDX90669 | Canola | cytosol | 32.03 | 35.96 |
| Solyc05g006850.2.1 | Tomato | cytosol | 37.5 | 35.56 |
| CDY43592 | Canola | cytosol | 33.59 | 34.96 |
| CDY32970 | Canola | cytosol | 33.59 | 34.96 |
| CDY53958 | Canola | cytosol | 31.25 | 34.19 |
| KRH74748 | Soybean | plastid | 36.72 | 34.06 |
| GSMUA_Achr7P16980_001 | Banana | cytosol | 27.34 | 33.98 |
| CDY36029 | Canola | cytosol | 31.25 | 33.9 |
| KRH69387 | Soybean | plastid | 35.94 | 33.33 |
| CDY57101 | Canola | cytosol | 42.19 | 32.73 |
| CDY34470 | Canola | cytosol | 14.06 | 31.03 |
| CDY37032 | Canola | cytosol | 42.97 | 29.41 |
| CDY34646 | Canola | cytosol | 28.12 | 28.57 |
| CDY35999 | Canola | cytosol | 30.47 | 27.86 |
| CDX73940 | Canola | cytosol | 28.91 | 26.43 |
| CDX72138 | Canola | mitochondrion | 30.47 | 26.17 |
| CDY27215 | Canola | mitochondrion | 30.47 | 26.17 |
| HORVU6Hr1G018190.1 | Barley | mitochondrion | 18.75 | 25.81 |
| CDY58647 | Canola | cytosol | 28.12 | 25.71 |
| CDY70695 | Canola | cytosol | 27.34 | 25.36 |
| CDY22165 | Canola | cytosol | 28.91 | 25.34 |
| CDY67121 | Canola | mitochondrion | 29.69 | 25.0 |
| CDY32015 | Canola | mitochondrion | 28.91 | 24.5 |
| CDX67647 | Canola | mitochondrion | 28.12 | 23.84 |
| CDY69984 | Canola | plastid | 34.38 | 23.66 |
| CDY38116 | Canola | plastid | 34.38 | 23.53 |
| CDY53739 | Canola | plastid | 29.69 | 20.99 |
| CDY51539 | Canola | plastid | 28.91 | 20.56 |
| CDY28704 | Canola | plastid | 28.91 | 20.56 |
| CDX73752 | Canola | cytosol, mitochondrion | 32.81 | 19.09 |
| CDY27984 | Canola | nucleus | 30.47 | 18.48 |
| CDY11641 | Canola | plastid | 28.12 | 17.39 |
| CDY00656 | Canola | cytosol | 28.91 | 9.92 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | GO:A0A078GZG2 | UniProt:A0A078GZG2 | EnsemblPlants:CDY30901 | ProteinID:CDY30901 |
| ProteinID:CDY30901.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006662 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00046416001 | InterPro:IPR013766 | PFAM:PF00085 | PIRSF:PIRSF000077 | ScanProsite:PS00194 |
| PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF278 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0004EEE4BE | : | : | : |
Description
BnaC09g15050DThioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A078GZG2]
Coordinates
chrLK032263:-:248256..249076
Molecular Weight (calculated)
14452.4 Da
IEP (calculated)
8.720
GRAVY (calculated)
-0.271
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNVSSVHD VPSSAETKNG LVVEMESRRQ WRSLFDSMKG SNKLLVIDFT AAWCGPCKAM EPRVKEIVSR YPEAVFARVD VDRFMDVAGT YRANTLPAFV
101: FVKRGEEIDR VVGAKPDELV YKIEKHRV
101: FVKRGEEIDR VVGAKPDELV YKIEKHRV
001: MGSNVSSVHD VHSSMEITSN GFVVEIESRR QWKSLFDSMK GSNKLLVIDF TAVWCGPCKA MEPRVREIAS KYSEAVFARV DVDRLMDVAG TYRAITLPAF
101: VFVKRGEEID RVVGAKPDEL VKKIEQHRV
101: VFVKRGEEID RVVGAKPDEL VKKIEQHRV
Arabidopsis Description
TRX7Thioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178WRN3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.