Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY58647 | Canola | cytosol | 89.04 | 92.86 |
CDX73940 | Canola | cytosol | 83.56 | 87.14 |
CDY35999 | Canola | cytosol | 83.56 | 87.14 |
AT3G08710.1 | Thale cress | cytosol | 80.14 | 83.57 |
KRH00477 | Soybean | cytosol | 69.18 | 72.66 |
VIT_08s0040g00020.t01 | Wine grape | cytosol | 67.81 | 71.22 |
PGSC0003DMT400076843 | Potato | cytosol | 37.67 | 67.07 |
Os01t0168200-01 | Rice | plasma membrane | 58.9 | 65.65 |
KRH09556 | Soybean | cytosol | 60.96 | 64.96 |
TraesCS1D01G114000.1 | Wheat | cytosol | 56.85 | 63.36 |
TraesCS1A01G112400.1 | Wheat | cytosol | 56.85 | 63.36 |
TraesCS1B01G132600.1 | Wheat | cytosol | 56.85 | 63.36 |
Zm00001d037499_P001 | Maize | cytosol | 56.85 | 62.41 |
Solyc09g015820.2.1 | Tomato | plastid | 65.75 | 62.34 |
Os05t0169000-01 | Rice | cytosol | 54.79 | 60.61 |
GSMUA_Achr5P27870_001 | Banana | cytosol | 58.22 | 60.28 |
KRH64869 | Soybean | cytosol | 63.01 | 60.13 |
CDY27984 | Canola | nucleus | 85.62 | 59.24 |
KRH40706 | Soybean | mitochondrion | 67.81 | 58.58 |
EES19112 | Sorghum | cytosol | 53.42 | 58.21 |
GSMUA_Achr8P01700_001 | Banana | cytosol | 54.11 | 56.83 |
HORVU1Hr1G024700.4 | Barley | cytosol | 54.79 | 54.79 |
KXG31771 | Sorghum | cytosol | 55.48 | 54.0 |
Zm00001d039710_P004 | Maize | cytosol | 52.74 | 53.47 |
GSMUA_AchrUn_... | Banana | cytosol, plasma membrane, plastid | 53.42 | 47.27 |
CDX77974 | Canola | cytosol | 31.51 | 40.35 |
CDX90669 | Canola | cytosol | 31.51 | 40.35 |
CDY28996 | Canola | cytosol | 31.51 | 40.35 |
CDY27215 | Canola | mitochondrion | 40.41 | 39.6 |
CDX72138 | Canola | mitochondrion | 40.41 | 39.6 |
CDY70695 | Canola | cytosol | 36.99 | 39.13 |
CDY67121 | Canola | mitochondrion | 40.41 | 38.82 |
CDY32015 | Canola | mitochondrion | 39.73 | 38.41 |
CDX67647 | Canola | mitochondrion | 39.73 | 38.41 |
CDY43592 | Canola | cytosol | 30.82 | 36.59 |
CDY32970 | Canola | cytosol | 30.82 | 36.59 |
CDY53958 | Canola | cytosol | 27.4 | 34.19 |
CDY00656 | Canola | cytosol | 86.3 | 33.78 |
CDY36029 | Canola | cytosol | 26.71 | 33.05 |
CDY34470 | Canola | cytosol | 13.01 | 32.76 |
CDY29406 | Canola | cytosol | 26.03 | 31.93 |
CDY39355 | Canola | cytosol | 26.03 | 31.93 |
CDX67442 | Canola | cytosol | 28.77 | 31.34 |
CDY34646 | Canola | cytosol | 26.71 | 30.95 |
CDY65333 | Canola | cytosol | 28.08 | 30.83 |
CDY27290 | Canola | cytosol | 26.71 | 30.47 |
CDY45144 | Canola | cytosol | 26.03 | 29.69 |
CDY30901 | Canola | cytosol | 25.34 | 28.91 |
CDY03743 | Canola | extracellular | 15.07 | 25.58 |
CDY38768 | Canola | cytosol, plastid | 25.34 | 24.5 |
CDY11645 | Canola | cytosol, plastid | 25.34 | 24.5 |
CDY48388 | Canola | cytosol | 23.29 | 23.13 |
CDY23544 | Canola | cytosol | 23.29 | 22.97 |
CDY69984 | Canola | plastid | 28.77 | 22.58 |
CDY38116 | Canola | plastid | 28.77 | 22.46 |
CDY04457 | Canola | cytosol | 15.07 | 22.45 |
CDY23543 | Canola | cytosol | 21.23 | 22.14 |
CDY48387 | Canola | cytosol | 21.23 | 21.99 |
CDY37032 | Canola | cytosol | 28.08 | 21.93 |
CDY57101 | Canola | cytosol | 24.66 | 21.82 |
CDY53739 | Canola | plastid | 26.71 | 21.55 |
CDX73752 | Canola | cytosol, mitochondrion | 31.51 | 20.91 |
CDY51539 | Canola | plastid | 24.66 | 20.0 |
CDY28704 | Canola | plastid | 23.29 | 18.89 |
CDY11641 | Canola | plastid | 13.7 | 9.66 |
Protein Annotations
MapMan:10.6.1 | Gene3D:3.40.30.10 | GO:A0A078G6S4 | UniProt:A0A078G6S4 | EnsemblPlants:CDY22165 | ProteinID:CDY22165 |
ProteinID:CDY22165.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006662 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 |
GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00018568001 | InterPro:IPR013766 | PFAM:PF00085 | PFscan:PS51352 | PANTHER:PTHR10438 |
PANTHER:PTHR10438:SF267 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0004EDEA82 |
Description
BnaC01g39360DBnaC01g39360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6S4]
Coordinates
chrLK032128:+:303229..305991
Molecular Weight (calculated)
16362.6 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.177
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPNKYYIIQ MGSCVSKDDT IHNVDFSGGN VHLITTKESW DEKLAEAGRD GKIVIANFSA TWCGPFKMLA PFYVELSEKH PSVVFLLVDV DELCDFSSSW
101: DIKATPTFFF LKNGQQIGKL VGANKPELQK KVTSIIDSLP QSPQQR
101: DIKATPTFFF LKNGQQIGKL VGANKPELQK KVTSIIDSLP QSPQQR
001: MGSCVSKGKG DDDSVHNVEF SGGNVHLITT KESWDDKLAE ADRDGKIVVA NFSATWCGPC KIVAPFFIEL SEKHSSLMFL LVDVDELSDF SSSWDIKATP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP
Arabidopsis Description
TRX9Thioredoxin H9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.