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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY58647 Canola cytosol 89.04 92.86
CDX73940 Canola cytosol 83.56 87.14
CDY35999 Canola cytosol 83.56 87.14
AT3G08710.1 Thale cress cytosol 80.14 83.57
KRH00477 Soybean cytosol 69.18 72.66
VIT_08s0040g00020.t01 Wine grape cytosol 67.81 71.22
PGSC0003DMT400076843 Potato cytosol 37.67 67.07
Os01t0168200-01 Rice plasma membrane 58.9 65.65
KRH09556 Soybean cytosol 60.96 64.96
TraesCS1D01G114000.1 Wheat cytosol 56.85 63.36
TraesCS1A01G112400.1 Wheat cytosol 56.85 63.36
TraesCS1B01G132600.1 Wheat cytosol 56.85 63.36
Zm00001d037499_P001 Maize cytosol 56.85 62.41
Solyc09g015820.2.1 Tomato plastid 65.75 62.34
Os05t0169000-01 Rice cytosol 54.79 60.61
GSMUA_Achr5P27870_001 Banana cytosol 58.22 60.28
KRH64869 Soybean cytosol 63.01 60.13
CDY27984 Canola nucleus 85.62 59.24
KRH40706 Soybean mitochondrion 67.81 58.58
EES19112 Sorghum cytosol 53.42 58.21
GSMUA_Achr8P01700_001 Banana cytosol 54.11 56.83
HORVU1Hr1G024700.4 Barley cytosol 54.79 54.79
KXG31771 Sorghum cytosol 55.48 54.0
Zm00001d039710_P004 Maize cytosol 52.74 53.47
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 53.42 47.27
CDX77974 Canola cytosol 31.51 40.35
CDX90669 Canola cytosol 31.51 40.35
CDY28996 Canola cytosol 31.51 40.35
CDY27215 Canola mitochondrion 40.41 39.6
CDX72138 Canola mitochondrion 40.41 39.6
CDY70695 Canola cytosol 36.99 39.13
CDY67121 Canola mitochondrion 40.41 38.82
CDY32015 Canola mitochondrion 39.73 38.41
CDX67647 Canola mitochondrion 39.73 38.41
CDY43592 Canola cytosol 30.82 36.59
CDY32970 Canola cytosol 30.82 36.59
CDY53958 Canola cytosol 27.4 34.19
CDY00656 Canola cytosol 86.3 33.78
CDY36029 Canola cytosol 26.71 33.05
CDY34470 Canola cytosol 13.01 32.76
CDY29406 Canola cytosol 26.03 31.93
CDY39355 Canola cytosol 26.03 31.93
CDX67442 Canola cytosol 28.77 31.34
CDY34646 Canola cytosol 26.71 30.95
CDY65333 Canola cytosol 28.08 30.83
CDY27290 Canola cytosol 26.71 30.47
CDY45144 Canola cytosol 26.03 29.69
CDY30901 Canola cytosol 25.34 28.91
CDY03743 Canola extracellular 15.07 25.58
CDY38768 Canola cytosol, plastid 25.34 24.5
CDY11645 Canola cytosol, plastid 25.34 24.5
CDY48388 Canola cytosol 23.29 23.13
CDY23544 Canola cytosol 23.29 22.97
CDY69984 Canola plastid 28.77 22.58
CDY38116 Canola plastid 28.77 22.46
CDY04457 Canola cytosol 15.07 22.45
CDY23543 Canola cytosol 21.23 22.14
CDY48387 Canola cytosol 21.23 21.99
CDY37032 Canola cytosol 28.08 21.93
CDY57101 Canola cytosol 24.66 21.82
CDY53739 Canola plastid 26.71 21.55
CDX73752 Canola cytosol, mitochondrion 31.51 20.91
CDY51539 Canola plastid 24.66 20.0
CDY28704 Canola plastid 23.29 18.89
CDY11641 Canola plastid 13.7 9.66
Protein Annotations
MapMan:10.6.1Gene3D:3.40.30.10GO:A0A078G6S4UniProt:A0A078G6S4EnsemblPlants:CDY22165ProteinID:CDY22165
ProteinID:CDY22165.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006662
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0045454
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00018568001InterPro:IPR013766PFAM:PF00085PFscan:PS51352PANTHER:PTHR10438
PANTHER:PTHR10438:SF267SUPFAM:SSF52833InterPro:ThioredoxinInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domainUniParc:UPI0004EDEA82
Description
BnaC01g39360DBnaC01g39360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6S4]
Coordinates
chrLK032128:+:303229..305991
Molecular Weight (calculated)
16362.6 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.177
Length
146 amino acids
Sequence
(BLAST)
001: MFPNKYYIIQ MGSCVSKDDT IHNVDFSGGN VHLITTKESW DEKLAEAGRD GKIVIANFSA TWCGPFKMLA PFYVELSEKH PSVVFLLVDV DELCDFSSSW
101: DIKATPTFFF LKNGQQIGKL VGANKPELQK KVTSIIDSLP QSPQQR
Best Arabidopsis Sequence Match ( AT3G08710.1 )
(BLAST)
001: MGSCVSKGKG DDDSVHNVEF SGGNVHLITT KESWDDKLAE ADRDGKIVVA NFSATWCGPC KIVAPFFIEL SEKHSSLMFL LVDVDELSDF SSSWDIKATP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP
Arabidopsis Description
TRX9Thioredoxin H9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Y6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.