Factsheet for Zm00001d037499_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003157_P001
Zm00001d020543_P001
Zm00001d025773_P002
Zm00001d051056_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G08710.1	Zm00001d003157_P001	AT3G02470.1	21798944
AT3G08710.1	Zm00001d020543_P001	AT3G02470.1	21798944
AT3G08710.1	Zm00001d025773_P002	AT3G02470.1	21798944
AT3G08710.1	Zm00001d051056_P001	AT3G02470.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19112	Sorghum	cytosol	87.97	87.31
TraesCS1D01G114000.1	Wheat	cytosol	85.71	87.02
TraesCS1B01G132600.1	Wheat	cytosol	85.71	87.02
TraesCS1A01G112400.1	Wheat	cytosol	85.71	87.02
Os05t0169000-01	Rice	cytosol	82.71	83.33
HORVU1Hr1G024700.4	Barley	cytosol	82.71	75.34
Zm00001d039710_P004	Maize	cytosol	80.45	74.31
GSMUA_Achr5P27870_001	Banana	cytosol	72.18	68.09
CDX73940	Canola	cytosol	64.66	61.43
CDY58647	Canola	cytosol	64.66	61.43
GSMUA_Achr8P01700_001	Banana	cytosol	63.91	61.15
AT3G08710.1	Thale cress	cytosol	63.91	60.71
CDY35999	Canola	cytosol	63.91	60.71
Bra040055.1-P	Field mustard	cytosol	61.65	59.85
PGSC0003DMT400076843	Potato	cytosol	36.84	59.76
VIT_08s0040g00020.t01	Wine grape	cytosol	62.41	59.71
KRH00477	Soybean	cytosol	60.9	58.27
CDY22165	Canola	cytosol	62.41	56.85
KRH09556	Soybean	cytosol	57.14	55.47
Solyc09g015820.2.1	Tomato	plastid	62.41	53.9
Bra001346.1-P	Field mustard	cytosol	64.66	52.44
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	63.91	51.52
KRH64869	Soybean	cytosol	57.14	49.67
KRH40706	Soybean	mitochondrion	60.15	47.34
PGSC0003DMT400059108	Potato	cytosol	47.37	45.32
Solyc03g095500.2.1	Tomato	cytosol	45.86	43.88
Bra014691.1-P	Field mustard	cytosol, mitochondrion	42.86	42.54
CDY70695	Canola	cytosol	42.86	41.3
CDY32015	Canola	mitochondrion	45.86	40.4
CDX67647	Canola	mitochondrion	45.86	40.4
CDY27984	Canola	nucleus	63.91	40.28
AT2G40790.1	Thale cress	cytosol	46.62	40.26
CDY67121	Canola	mitochondrion	45.86	40.13
Bra007245.1-P	Field mustard	plastid	42.11	40.0
AT3G56420.2	Thale cress	mitochondrion	45.11	38.96
CDY27215	Canola	mitochondrion	43.61	38.93
CDX72138	Canola	mitochondrion	43.61	38.93
Zm00001d007800_P001	Maize	cytosol	34.59	38.33
Zm00001d038652_P003	Maize	cytosol	36.09	37.5
Zm00001d019034_P001	Maize	cytosol, extracellular, mitochondrion	33.83	36.89
Zm00001d038486_P002	Maize	cytosol	35.34	32.87
Zm00001d026368_P001	Maize	cytosol, extracellular	31.58	32.56
Zm00001d034491_P001	Maize	plastid	31.58	31.58
Zm00001d019035_P001	Maize	cytosol	29.32	30.95
CDY00656	Canola	cytosol	64.66	23.06
Zm00001d024835_P001	Maize	plastid	27.82	20.56
Zm00001d010871_P001	Maize	plastid	27.82	18.41

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	EntrezGene:541940	EMBL:AF435816	ProteinID:AQK84117.1	ProteinID:AQK84118.1
ProteinID:AQK84119.1	EMBL:BT064779	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006662	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766	PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF267	UniProt:Q8H6X5	SUPFAM:SSF52833
InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI00000AD3CE	EnsemblPlantsGene:Zm00001d037499
EnsemblPlants:Zm00001d037499_P001	EnsemblPlants:Zm00001d037499_T001	:	:	:	:

Description

Thioredoxin H9

Coordinates

chr6:+:127482891..127494100

Molecular Weight (calculated)

14639.3 Da

IEP (calculated)

4.917

GRAVY (calculated)

-0.314

Length

133 amino acids

Sequence
(BLAST)

001: MGGCAGKVRR DDEEKLDFKG GNVHIITSNE GWDQKIAEAN RDGKTVVANF SASWCGPCRV IAPVYAEMSK TYPQLMFLTI DVDDLMDFSS SWDIRATPTF
101: FFLKNGQQID KLVGANKPEL EKKVLAAADA STS

Best Arabidopsis Sequence Match ( AT3G08710.2 )
(BLAST)

001: MGSCVSKGKG DDDSVHNVEF SGGNVHLITT KESWDDKLAE ADRDGKIVVA NFSATWCGPC KIVAPFFIEL SEKHSSLMFL LVDVDELSDF SSSWDIKATP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP

Arabidopsis Description

TRX9Thioredoxin H9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Y6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.