Factsheet for Zm00001d026368_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82388	Sorghum	cytosol	93.02	93.02
Os04t0629500-01	Rice	cytosol	83.72	81.2
TraesCS2D01G479600.1	Wheat	cytosol	70.54	65.47
TraesCS2A01G480300.1	Wheat	cytosol	70.54	65.47
TraesCS2B01G505100.1	Wheat	cytosol	69.77	64.75
HORVU2Hr1G107990.1	Barley	cytosol	68.22	63.77
GSMUA_Achr5P26380_001	Banana	cytosol	51.16	51.16
KRH10686	Soybean	cytosol	48.06	50.0
KRH21649	Soybean	cytosol, plastid	48.06	49.6
Solyc02g079960.2.1	Tomato	cytosol	47.29	48.8
PGSC0003DMT400055905	Potato	cytosol	47.29	48.8
VIT_00s0532g00030.t01	Wine grape	cytosol	47.29	48.41
CDY34646	Canola	cytosol	46.51	47.62
Bra031769.1-P	Field mustard	cytosol	45.74	46.83
VIT_19s0014g05090.t01	Wine grape	cytosol	45.74	46.83
AT1G11530.1	Thale cress	cytosol	42.64	46.61
KRH22228	Soybean	cytosol	42.64	45.08
KRH25890	Soybean	nucleus	43.41	44.44
KRH55615	Soybean	cytosol	41.86	42.86
KRH33304	Soybean	cytosol	41.86	42.86
KRH27111	Soybean	nucleus	41.86	42.86
Zm00001d019034_P001	Maize	cytosol, extracellular, mitochondrion	31.78	33.61
Zm00001d037499_P001	Maize	cytosol	32.56	31.58
Zm00001d039710_P004	Maize	cytosol	34.11	30.56
Zm00001d007800_P001	Maize	cytosol	26.36	28.33
Zm00001d019035_P001	Maize	cytosol	27.13	27.78
Zm00001d038652_P003	Maize	cytosol	26.36	26.56
Zm00001d034491_P001	Maize	plastid	27.13	26.32
Zm00001d024835_P001	Maize	plastid	23.26	16.67
Zm00001d010871_P001	Maize	plastid	22.48	14.43
Zm00001d038486_P002	Maize	cytosol	14.73	13.29

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	ProteinID:AQK46395.1	UniProt:B6THR4	EMBL:EU964529	GO:GO:0003674
GO:GO:0003756	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006662	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766	PFAM:PF00085	PFscan:PS51352
PANTHER:PTHR10438	PANTHER:PTHR10438:SF242	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI000182B354	EnsemblPlantsGene:Zm00001d026368	EnsemblPlants:Zm00001d026368_P001	EnsemblPlants:Zm00001d026368_T001	SEG:seg	:

Description

Thioredoxin-like protein CXXS1

Coordinates

chr10:-:144424159..144426437

Molecular Weight (calculated)

14354.0 Da

IEP (calculated)

4.759

GRAVY (calculated)

-0.143

Length

129 amino acids

Sequence
(BLAST)

001: MEIQHHRGLG NSKVVKVQSE EAWDLFTDQA SNEGRPVVAH FGASWCVTSL SMNYKFEELA QTHPEVLFLY VDVDDVQSVS SRYGVKAMPT FFLIKSKEVV
101: GKIVGANPDE VKKLVDASAE PLETQIVVE

Best Arabidopsis Sequence Match ( AT1G11530.1 )
(BLAST)

001: MARVVKIDSA ESWNFYVSQA KNQNCPIVAH FTALWCIPSV FMNSFFEELA FNYKDALFLI VDVDEVKEVA SQLEVKAMPT FLFLKDGNAM DKLVGANPDE
101: IKKRVDGFVQ SSRVVHIA

Arabidopsis Description

CXXS1Thioredoxin-like protein CXXS1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.