CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21649	Soybean	cytosol, plastid	92.74	92.0
KRH22228	Soybean	cytosol	61.29	62.3
VIT_00s0532g00030.t01	Wine grape	cytosol	62.9	61.9
PGSC0003DMT400055905	Potato	cytosol	62.1	61.6
Solyc02g079960.2.1	Tomato	cytosol	60.48	60.0
KRH27111	Soybean	nucleus	59.68	58.73
KRH25890	Soybean	nucleus	57.26	56.35
GSMUA_Achr9P30140_001	Banana	cytosol	59.68	55.22
KRH55615	Soybean	cytosol	54.03	53.17
KRH33304	Soybean	cytosol	51.61	50.79
Os04t0629500-01	Rice	cytosol	54.03	50.38
Zm00001d026368_P001	Maize	cytosol, extracellular	50.0	48.06
GSMUA_Achr5P26380_001	Banana	cytosol	50.0	48.06
OQU82388	Sorghum	cytosol	50.0	48.06
KRH15131	Soybean	cytosol, nucleus	40.32	42.02
KRH05879	Soybean	endoplasmic reticulum	39.52	39.84
TraesCS2A01G480300.1	Wheat	cytosol	43.55	38.85
KRH51778	Soybean	endoplasmic reticulum	36.29	38.46
HORVU2Hr1G107990.1	Barley	cytosol	42.74	38.41
TraesCS2B01G505100.1	Wheat	cytosol	42.74	38.13
KRG99185	Soybean	cytosol, plastid	37.1	38.02
KRH45834	Soybean	cytosol, plastid	37.1	38.02
KRH61100	Soybean	cytosol	35.48	37.61
TraesCS2D01G479600.1	Wheat	cytosol	41.94	37.41
KRH74754	Soybean	cytosol	37.9	37.3
KRH74753	Soybean	cytosol	36.29	36.29
KRH69383	Soybean	cytosol	37.1	36.22
KRH76717	Soybean	endoplasmic reticulum, nucleus	33.87	35.0
KRH40138	Soybean	cytosol, plastid	34.68	34.4
KRH69384	Soybean	cytosol	35.48	34.38
KRH09556	Soybean	cytosol	37.9	34.31
KRH28739	Soybean	cytosol	33.06	34.17
KRH40137	Soybean	endoplasmic reticulum	35.48	33.59
KRH01123	Soybean	cytosol	33.06	33.33
KRH01124	Soybean	endoplasmic reticulum	35.48	33.08
KRH00477	Soybean	cytosol	35.48	31.65
KRH01119	Soybean	cytosol	35.48	31.43
KRH64869	Soybean	cytosol	37.1	30.07
KRH74748	Soybean	plastid	33.06	29.71
KRH69387	Soybean	plastid	32.26	28.99
KRH40136	Soybean	endoplasmic reticulum	36.29	28.66
KRH40706	Soybean	mitochondrion	34.68	25.44
KRH00940	Soybean	nucleus, plastid	28.23	19.55
KRH40285	Soybean	plastid	27.42	18.78

Protein Annotations

MapMan:10.6.1	EntrezGene:100500012	Gene3D:3.40.30.10	EMBL:ACUP02009152	EMBL:BT090520	UniProt:C6SZC0
EnsemblPlantsGene:GLYMA_15G063100	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006662	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0016671	GO:GO:0019725	GO:GO:0034599	GO:GO:0045454
GO:GO:0047134	GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766	EnsemblPlants:KRH10686	ProteinID:KRH10686
ProteinID:KRH10686.1	PFAM:PF00085	PIRSF:PIRSF000077	PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF242
SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0001B15009	:

Description

hypothetical protein

Coordinates

chr15:-:4829928..4832753

Molecular Weight (calculated)

13674.3 Da

IEP (calculated)

4.342

GRAVY (calculated)

0.019

Length

124 amino acids

Sequence
(BLAST)

001: MEASEQNNSK VVLIDSLQSW EFHVNQAYNQ NTPVVVHFTA SWCMPSVAMT PVFEELASSY PEVLFLTVDV DEVKEVATKM DVKAMPTFLL LKDGAAVDKV
101: VGANPEEIKK RIDGVAESTR VSLA

Best Arabidopsis Sequence Match ( AT1G11530.1 )
(BLAST)

001: MARVVKIDSA ESWNFYVSQA KNQNCPIVAH FTALWCIPSV FMNSFFEELA FNYKDALFLI VDVDEVKEVA SQLEVKAMPT FLFLKDGNAM DKLVGANPDE
101: IKKRVDGFVQ SSRVVHIA

Arabidopsis Description

CXXS1Thioredoxin-like protein CXXS1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.