CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33304	Soybean	cytosol	92.86	92.86
KRH25890	Soybean	nucleus	91.27	91.27
KRH27111	Soybean	nucleus	71.43	71.43
KRH22228	Soybean	cytosol	67.46	69.67
VIT_19s0014g05090.t01	Wine grape	cytosol	62.7	62.7
GSMUA_Achr9P30140_001	Banana	cytosol	61.9	58.21
PGSC0003DMT400055905	Potato	cytosol	54.76	55.2
Solyc02g079960.2.1	Tomato	cytosol	53.97	54.4
KRH10686	Soybean	cytosol	53.17	54.03
KRH21649	Soybean	cytosol, plastid	50.79	51.2
AT1G11530.1	Thale cress	cytosol	46.83	50.0
GSMUA_Achr5P26380_001	Banana	cytosol	49.21	48.06
Bra031769.1-P	Field mustard	cytosol	47.62	47.62
CDY34646	Canola	cytosol	46.83	46.83
Os04t0629500-01	Rice	cytosol	45.24	42.86
OQU82388	Sorghum	cytosol	42.86	41.86
Zm00001d026368_P001	Maize	cytosol, extracellular	42.86	41.86
TraesCS2A01G480300.1	Wheat	cytosol	43.65	39.57
TraesCS2B01G505100.1	Wheat	cytosol	42.86	38.85
HORVU2Hr1G107990.1	Barley	cytosol	42.06	38.41
TraesCS2D01G479600.1	Wheat	cytosol	42.06	38.13
KRH15131	Soybean	cytosol, nucleus	30.95	32.77
KRH05879	Soybean	endoplasmic reticulum	30.95	31.71
KRH76717	Soybean	endoplasmic reticulum, nucleus	29.37	30.83
KRH51778	Soybean	endoplasmic reticulum	28.57	30.77
KRH61100	Soybean	cytosol	28.57	30.77
KRH74753	Soybean	cytosol	30.16	30.65
KRH74754	Soybean	cytosol	30.16	30.16
KRH28739	Soybean	cytosol	28.57	30.0
KRG99185	Soybean	cytosol, plastid	28.57	29.75
KRH69384	Soybean	cytosol	30.16	29.69
KRH09556	Soybean	cytosol	31.75	29.2
KRH69383	Soybean	cytosol	29.37	29.13
KRH45834	Soybean	cytosol, plastid	27.78	28.93
KRH01124	Soybean	endoplasmic reticulum	30.16	28.57
KRH01123	Soybean	cytosol	27.78	28.46
KRH00477	Soybean	cytosol	30.95	28.06
KRH40138	Soybean	cytosol, plastid	27.78	28.0
KRH40137	Soybean	endoplasmic reticulum	28.57	27.48
KRH01119	Soybean	cytosol	29.37	26.43
KRH64869	Soybean	cytosol	31.75	26.14
KRH40136	Soybean	endoplasmic reticulum	30.95	24.84
KRH74748	Soybean	plastid	26.19	23.91
KRH69387	Soybean	plastid	25.4	23.19
KRH40706	Soybean	mitochondrion	30.16	22.49
KRH00940	Soybean	nucleus, plastid	25.4	17.88
KRH40285	Soybean	plastid	24.6	17.13

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	EMBL:ACUP02004029	EnsemblPlantsGene:GLYMA_06G266700	GO:GO:0003674	GO:GO:0003824
GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006662
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0016671
GO:GO:0019725	GO:GO:0034599	GO:GO:0045454	GO:GO:0047134	GO:GO:0055114	GO:GO:0098869
UniProt:I1KEE9	InterPro:IPR013766	EnsemblPlants:KRH55615	ProteinID:KRH55615	ProteinID:KRH55615.1	PFAM:PF00085
PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF364	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI00023C7CB0	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:45472756..45474608

Molecular Weight (calculated)

14357.5 Da

IEP (calculated)

9.979

GRAVY (calculated)

-0.325

Length

126 amino acids

Sequence
(BLAST)

001: MKGQQQLKKS KVVKIDSRKS WEHHITNATN KGYPVMVHFS AYWCMPSIAM NHFFQQLAST YQNVLFLNVD VDEVKEVASK LEIKAIPTFC LMNGGAPVDK
101: IVGANPDELR KRINCFIHQK HSPKSV

Best Arabidopsis Sequence Match ( AT1G11530.1 )
(BLAST)

001: MARVVKIDSA ESWNFYVSQA KNQNCPIVAH FTALWCIPSV FMNSFFEELA FNYKDALFLI VDVDEVKEVA SQLEVKAMPT FLFLKDGNAM DKLVGANPDE
101: IKKRVDGFVQ SSRVVHIA

Arabidopsis Description

CXXS1Thioredoxin-like protein CXXS1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.