Factsheet for GSMUA_Achr5P26380_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P30140_001	Banana	cytosol	68.99	66.42
VIT_00s0532g00030.t01	Wine grape	cytosol	55.04	56.35
VIT_19s0014g05090.t01	Wine grape	cytosol	54.26	55.56
Solyc02g079960.2.1	Tomato	cytosol	50.39	52.0
PGSC0003DMT400055905	Potato	cytosol	49.61	51.2
Zm00001d026368_P001	Maize	cytosol, extracellular	51.16	51.16
Os04t0629500-01	Rice	cytosol	52.71	51.13
AT1G11530.1	Thale cress	cytosol	46.51	50.85
KRH22228	Soybean	cytosol	48.06	50.82
Bra031769.1-P	Field mustard	cytosol	49.61	50.79
OQU82388	Sorghum	cytosol	50.39	50.39
CDY34646	Canola	cytosol	48.84	50.0
KRH10686	Soybean	cytosol	48.06	50.0
KRH25890	Soybean	nucleus	48.84	50.0
KRH21649	Soybean	cytosol, plastid	48.06	49.6
KRH55615	Soybean	cytosol	48.06	49.21
KRH27111	Soybean	nucleus	47.29	48.41
TraesCS2D01G479600.1	Wheat	cytosol	49.61	46.04
TraesCS2A01G480300.1	Wheat	cytosol	49.61	46.04
HORVU2Hr1G107990.1	Barley	cytosol	48.84	45.65
TraesCS2B01G505100.1	Wheat	cytosol	48.06	44.6
KRH33304	Soybean	cytosol	43.41	44.44
GSMUA_Achr4P22400_001	Banana	cytosol, unclear	30.23	34.21
GSMUA_Achr2P17610_001	Banana	cytosol	27.13	30.7
GSMUA_Achr5P27870_001	Banana	cytosol	31.01	28.37
GSMUA_Achr8P01700_001	Banana	cytosol	30.23	28.06
GSMUA_Achr2P17710_001	Banana	cytosol	26.36	26.77
GSMUA_Achr7P16980_001	Banana	cytosol	19.38	24.27
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	22.48	23.39
GSMUA_Achr7P12220_001	Banana	cytosol	17.83	19.83
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	24.03	18.79
GSMUA_Achr8P01040_001	Banana	plastid	22.48	16.2
GSMUA_Achr11P...	Banana	mitochondrion	13.18	10.56

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006662	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G26380_001	EnsemblPlants:GSMUA_Achr5P26380_001	EnsemblPlants:GSMUA_Achr5T26380_001	InterPro:IPR013766
UniProt:M0T1W3	PFAM:PF00085	PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF242	SUPFAM:SSF52833
InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000295414C	:	:

Description

Thioredoxin-like protein CXXS1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G26380_001]

Coordinates

chr5:-:27202537..27203153

Molecular Weight (calculated)

14234.1 Da

IEP (calculated)

4.581

GRAVY (calculated)

-0.047

Length

129 amino acids

Sequence
(BLAST)

001: MAAAEQPQEV KSKVAKVDSE ESWDLFTTQA DDRGCPVFVH FGASWCVPSL AMNTCFEELA NSHQDILFLL VDVDEAKGVA SRMEVKAMPT FVLMKHGTVL
101: SKMVGANPEE MRKMVQCYVQ SICPATTSE

Best Arabidopsis Sequence Match ( AT1G11530.1 )
(BLAST)

001: MARVVKIDSA ESWNFYVSQA KNQNCPIVAH FTALWCIPSV FMNSFFEELA FNYKDALFLI VDVDEVKEVA SQLEVKAMPT FLFLKDGNAM DKLVGANPDE
101: IKKRVDGFVQ SSRVVHIA

Arabidopsis Description

CXXS1Thioredoxin-like protein CXXS1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.