Factsheet for GSMUA_Achr8P01040_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0023g00740.t01	Wine grape	plastid	61.45	63.95
KRH00940	Soybean	nucleus, plastid	60.34	60.34
TraesCS3A01G418400.1	Wheat	plastid	63.13	59.79
TraesCS3B01G453600.1	Wheat	plastid	62.57	59.26
KRH40285	Soybean	plastid	59.22	58.56
Zm00001d024835_P001	Maize	plastid	58.66	58.33
Os01t0913000-01	Rice	plastid	60.89	58.29
Bra021417.1-P	Field mustard	plastid	59.22	58.24
AT3G02730.1	Thale cress	plastid	57.54	57.87
CDY53739	Canola	plastid	58.1	57.46
KXG21303	Sorghum	plastid	60.34	56.25
Solyc05g056300.2.1	Tomato	plastid	55.87	54.95
PGSC0003DMT400059966	Potato	cytosol, extracellular, plastid	55.87	54.95
CDY51539	Canola	plastid	54.75	54.44
AT5G16400.1	Thale cress	plastid	55.87	54.05
Bra040596.1-P	Field mustard	plastid	54.19	53.59
CDY28704	Canola	plastid	53.63	53.33
Zm00001d010871_P001	Maize	plastid	58.66	52.24
Bra023564.1-P	Field mustard	plastid	54.19	51.87
CDY69984	Canola	plastid	53.63	51.61
CDY38116	Canola	plastid	53.63	51.34
GSMUA_Achr11P...	Banana	mitochondrion	43.58	48.45
GSMUA_Achr4P22400_001	Banana	cytosol, unclear	21.79	34.21
GSMUA_Achr2P17610_001	Banana	cytosol	21.79	34.21
GSMUA_Achr8P01700_001	Banana	cytosol	22.35	28.78
GSMUA_Achr5P27870_001	Banana	cytosol	21.23	26.95
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	16.76	24.19
GSMUA_Achr2P17710_001	Banana	cytosol	16.76	23.62
GSMUA_Achr7P12220_001	Banana	cytosol	15.08	23.28
GSMUA_Achr5P26380_001	Banana	cytosol	16.2	22.48
GSMUA_Achr7P16980_001	Banana	cytosol	12.85	22.33
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	20.11	21.82
GSMUA_Achr9P30140_001	Banana	cytosol	15.64	20.9

Protein Annotations

MapMan:10.5.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006662	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr8G01040_001	EnsemblPlants:GSMUA_Achr8P01040_001	EnsemblPlants:GSMUA_Achr8T01040_001	InterPro:IPR013766
UniProt:M0TLK6	PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF258	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI0002949720	SEG:seg	:	:	:	:

Description

Thioredoxin F2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G01040_001]

Coordinates

chr8:+:885341..889270

Molecular Weight (calculated)

19313.4 Da

IEP (calculated)

9.620

GRAVY (calculated)

-0.154

Length

179 amino acids

Sequence
(BLAST)

001: MALRIALSSP SIRSTTSSPS SSCGNHPPSS LSRFLGCPHG RSPGEPLTAS GRSRRAAVVA TSNLETAVPA VGQVTEVDKD TFWPLVKAAG ERVVVLDMYT
101: RWCGPCKVMA PKFKELSEKH LDVVFMKLDC NQENRPLAKE LGIKVVPTFK ILKDGKVVKE VTGAKYDDLV VAIETTKSS

Best Arabidopsis Sequence Match ( AT3G02730.1 )
(BLAST)

001: MPLSLRLSPS PTALSPTTGG FGPSRKQCRI PYSGVPTTKI GFCSLDSRKR GDSSVVRCSL ETVNVSVGQV TEVDKDTFWP IVKAAGEKLV VLDMYTQWCG
101: PCKVIAPKYK ALSEKYDDVV FLKLDCNPDN RPLAKELGIR VVPTFKILKD NKVVKEVTGA KYDDLVAAIE TARSAASG

Arabidopsis Description

TRXF1TRXF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBJ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.