Factsheet for GSMUA_Achr7P16980_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P17710_001	Banana	cytosol	78.64	63.78
TraesCS5D01G454800.1	Wheat	cytosol	58.25	45.8
TraesCS5A01G448200.1	Wheat	cytosol	57.28	45.04
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	57.28	45.04
Os03t0800700-01	Rice	plastid	58.25	44.78
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	51.46	42.74
EER90722	Sorghum	cytosol	54.37	42.11
Zm00001d034491_P001	Maize	plastid	53.4	41.35
Os07t0190800-01	Rice	cytosol	52.43	39.13
KRH01123	Soybean	cytosol	45.63	38.21
KRH40137	Soybean	endoplasmic reticulum	47.57	37.4
KRH01124	Soybean	endoplasmic reticulum	47.57	36.84
PGSC0003DMT400003564	Potato	plastid	49.51	35.92
GSMUA_Achr7P12220_001	Banana	cytosol	39.81	35.34
KRH40138	Soybean	cytosol, plastid	42.72	35.2
GSMUA_Achr4P22400_001	Banana	cytosol, unclear	38.84	35.09
KRH74753	Soybean	cytosol	41.75	34.68
KRH74754	Soybean	cytosol	41.75	34.13
VIT_14s0066g02560.t01	Wine grape	cytosol	43.69	33.09
KRH69383	Soybean	cytosol	40.78	33.07
VIT_01s0026g01460.t01	Wine grape	cytosol	38.84	33.06
Solyc05g006830.2.1	Tomato	cytosol, plastid	42.72	32.59
PGSC0003DMT400045450	Potato	cytosol	42.72	32.59
CDY65333	Canola	cytosol	41.75	32.33
Bra028445.1-P	Field mustard	cytosol	41.75	32.33
AT5G39950.1	Thale cress	cytosol	41.75	32.33
Bra040318.1-P	Field mustard	cytosol	40.78	32.31
KRH45834	Soybean	cytosol, plastid	37.86	32.23
KRG99185	Soybean	cytosol, plastid	37.86	32.23
CDX67442	Canola	cytosol	41.75	32.09
Solyc05g006870.2.1	Tomato	cytosol	41.75	31.85
Solyc04g005810.2.1	Tomato	plastid	40.78	31.58
KRH40136	Soybean	endoplasmic reticulum	46.6	30.57
KRH69384	Soybean	cytosol	37.86	30.47
KRH01119	Soybean	cytosol	40.78	30.0
Solyc05g006860.2.1	Tomato	cytosol	38.84	29.63
AT1G59730.1	Thale cress	cytosol	34.95	27.91
Bra027837.1-P	Field mustard	cytosol	33.98	27.34
Bra017898.1-P	Field mustard	cytosol	33.98	27.34
CDY30901	Canola	cytosol	33.98	27.34
CDY45144	Canola	cytosol	33.98	27.34
KRH74748	Soybean	plastid	35.92	26.81
Solyc05g006850.2.1	Tomato	cytosol	34.95	26.67
Solyc02g087630.2.1	Tomato	plastid	43.69	26.63
CDY27290	Canola	cytosol	33.01	26.56
GSMUA_Achr2P17610_001	Banana	cytosol	29.13	26.32
KRH69387	Soybean	plastid	34.95	26.09
PGSC0003DMT400045460	Potato	cytosol	16.5	25.0
CDY57101	Canola	cytosol	38.84	24.24
GSMUA_Achr5P27870_001	Banana	cytosol	32.04	23.4
CDY38768	Canola	cytosol, plastid	33.98	23.18
Bra016258.1-P	Field mustard	cytosol	33.98	23.18
CDY23543	Canola	cytosol	31.07	22.86
Bra003976.1-P	Field mustard	cytosol	31.07	22.7
CDY48387	Canola	cytosol	31.07	22.7
CDY11645	Canola	cytosol, plastid	33.01	22.52
CDY37032	Canola	cytosol	40.78	22.46
CDY48388	Canola	cytosol	31.07	21.77
CDY23544	Canola	cytosol	31.07	21.62
Bra003977.1-P	Field mustard	cytosol	31.07	21.48
GSMUA_Achr8P01700_001	Banana	cytosol	28.16	20.86
AT1G69880.1	Thale cress	plastid	29.13	20.27
GSMUA_Achr5P26380_001	Banana	cytosol	24.27	19.38
GSMUA_Achr9P30140_001	Banana	cytosol	24.27	18.66
CDY03743	Canola	extracellular	14.56	17.44
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	26.21	16.36
CDY04457	Canola	cytosol	14.56	15.31
GSMUA_Achr8P01040_001	Banana	plastid	22.33	12.85
CDY11641	Canola	plastid	20.39	10.14
GSMUA_Achr11P...	Banana	mitochondrion	12.62	8.07

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006662	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G16980_001	EnsemblPlants:GSMUA_Achr7P16980_001	EnsemblPlants:GSMUA_Achr7T16980_001	InterPro:IPR013766
UniProt:M0TI85	PFAM:PF00085	PANTHER:PTHR10438	PANTHER:PTHR10438:SF243	SUPFAM:SSF52833	InterPro:Thioredoxin
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0002967F88	SEG:seg	:	:

Description

Putative Thioredoxin H2-2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G16980_001]

Coordinates

chr7:+:17948795..17949557

Molecular Weight (calculated)

11280.5 Da

IEP (calculated)

6.779

GRAVY (calculated)

-0.100

Length

103 amino acids

Sequence
(BLAST)

001: MGGLFSSQAA AAAEVGDSAV IAVHSVGEWT HNWQSHTQNN KMMVIDFSAS WCGPCRFLPE VSKQWKVQAM SSFALVKGGQ EVARVVGAMK DELERRIQEQ
101: LSI

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.