Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016258.1-P | Field mustard | cytosol | 41.55 | 56.95 |
| CDY38768 | Canola | cytosol, plastid | 41.55 | 56.95 |
| CDY11645 | Canola | cytosol, plastid | 41.06 | 56.29 |
| AT1G69880.1 | Thale cress | plastid | 33.33 | 46.62 |
| CDY23544 | Canola | cytosol | 31.88 | 44.59 |
| CDY48388 | Canola | cytosol | 31.4 | 44.22 |
| CDY23543 | Canola | cytosol | 28.02 | 41.43 |
| CDY48387 | Canola | cytosol | 28.02 | 41.13 |
| CDY03743 | Canola | extracellular | 12.08 | 29.07 |
| CDY27290 | Canola | cytosol | 17.87 | 28.91 |
| CDY30901 | Canola | cytosol | 17.39 | 28.12 |
| CDY45144 | Canola | cytosol | 16.91 | 27.34 |
| CDY04457 | Canola | cytosol | 12.08 | 25.51 |
| PGSC0003DMT400045460 | Potato | cytosol | 8.21 | 25.0 |
| KRH69384 | Soybean | cytosol | 14.01 | 22.66 |
| GSMUA_Achr9P10960_001 | Banana | mitochondrion, plastid | 13.04 | 21.77 |
| TraesCS5D01G454800.1 | Wheat | cytosol | 13.53 | 21.37 |
| HORVU5Hr1G107210.1 | Barley | cytosol | 13.04 | 20.61 |
| TraesCS5B01G452700.1 | Wheat | cytosol, golgi, unclear | 13.04 | 20.61 |
| TraesCS5A01G448200.1 | Wheat | cytosol | 13.04 | 20.61 |
| GSMUA_Achr7P16980_001 | Banana | cytosol | 10.14 | 20.39 |
| KRH69387 | Soybean | plastid | 13.53 | 20.29 |
| CDX77974 | Canola | cytosol | 11.11 | 20.18 |
| KRH74753 | Soybean | cytosol | 12.08 | 20.16 |
| Os03t0800700-01 | Rice | plastid | 13.04 | 20.15 |
| VIT_01s0026g01460.t01 | Wine grape | cytosol | 11.59 | 19.83 |
| GSMUA_Achr2P17710_001 | Banana | cytosol | 12.08 | 19.68 |
| CDY53958 | Canola | cytosol | 11.11 | 19.66 |
| KRH74748 | Soybean | plastid | 13.04 | 19.57 |
| CDY36029 | Canola | cytosol | 11.11 | 19.49 |
| CDX90669 | Canola | cytosol | 10.63 | 19.3 |
| Solyc05g006870.2.1 | Tomato | cytosol | 12.56 | 19.26 |
| KRH74754 | Soybean | cytosol | 11.59 | 19.05 |
| KRG99185 | Soybean | cytosol, plastid | 11.11 | 19.01 |
| KRH69383 | Soybean | cytosol | 11.59 | 18.9 |
| HORVU5Hr1G107170.1 | Barley | cytosol | 13.04 | 18.62 |
| Solyc05g006830.2.1 | Tomato | cytosol, plastid | 12.08 | 18.52 |
| CDY28996 | Canola | cytosol | 10.14 | 18.42 |
| KRH45834 | Soybean | cytosol, plastid | 10.63 | 18.18 |
| Os07t0190800-01 | Rice | cytosol | 12.08 | 18.12 |
| Zm00001d034491_P001 | Maize | plastid | 11.59 | 18.05 |
| CDY65333 | Canola | cytosol | 11.59 | 18.05 |
| CDY32970 | Canola | cytosol | 10.63 | 17.89 |
| CDY43592 | Canola | cytosol | 10.63 | 17.89 |
| Solyc05g006850.2.1 | Tomato | cytosol | 11.59 | 17.78 |
| PGSC0003DMT400045450 | Potato | cytosol | 11.59 | 17.78 |
| CDY39355 | Canola | cytosol | 10.14 | 17.65 |
| CDY70695 | Canola | cytosol | 11.59 | 17.39 |
| EER90722 | Sorghum | cytosol | 11.11 | 17.29 |
| CDX67442 | Canola | cytosol | 11.11 | 17.16 |
| CDY67121 | Canola | mitochondrion | 12.56 | 17.11 |
| Solyc05g006860.2.1 | Tomato | cytosol | 11.11 | 17.04 |
| CDY29406 | Canola | cytosol | 9.66 | 16.81 |
| CDY37032 | Canola | cytosol | 14.98 | 16.58 |
| CDY57101 | Canola | cytosol | 13.04 | 16.36 |
| CDX72138 | Canola | mitochondrion | 11.11 | 15.44 |
| Solyc04g005810.2.1 | Tomato | plastid | 9.66 | 15.04 |
| CDY27215 | Canola | mitochondrion | 10.63 | 14.77 |
| CDY32015 | Canola | mitochondrion | 10.63 | 14.57 |
| CDX67647 | Canola | mitochondrion | 10.63 | 14.57 |
| CDX73940 | Canola | cytosol | 9.66 | 14.29 |
| CDY58647 | Canola | cytosol | 9.66 | 14.29 |
| HORVU6Hr1G018190.1 | Barley | mitochondrion | 6.28 | 13.98 |
| CDY22165 | Canola | cytosol | 9.66 | 13.7 |
| CDY35999 | Canola | cytosol | 9.18 | 13.57 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 7.25 | 12.93 |
| CDY69984 | Canola | plastid | 11.59 | 12.9 |
| CDY38116 | Canola | plastid | 11.59 | 12.83 |
| CDY34646 | Canola | cytosol | 7.73 | 12.7 |
| CDY53739 | Canola | plastid | 10.14 | 11.6 |
| CDY28704 | Canola | plastid | 9.66 | 11.11 |
| CDY51539 | Canola | plastid | 9.66 | 11.11 |
| CDX73752 | Canola | cytosol, mitochondrion | 11.11 | 10.45 |
| CDY27984 | Canola | nucleus | 9.18 | 9.0 |
| CDY34470 | Canola | cytosol | 1.93 | 6.9 |
| CDY00656 | Canola | cytosol | 9.18 | 5.09 |
Protein Annotations
| EnsemblPlants:CDY11641 | EnsemblPlantsGene:GSBRNA2T00049778001 | Gene3D:3.40.30.10 | GO:A0A078FEG1 | GO:GO:0005575 | GO:GO:0005623 |
| InterPro:Thioredoxin-like_sf | ProteinID:CDY11641 | ProteinID:CDY11641.1 | SEG:seg | SUPFAM:SSF52833 | UniParc:UPI0004EEF1F2 |
| UniProt:A0A078FEG1 | MapMan:35.1 | : | : | : | : |
Description
BnaC06g30980DBnaC06g30980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEG1]
Coordinates
chrLK032012:-:698345..700075
Molecular Weight (calculated)
24316.9 Da
IEP (calculated)
10.936
GRAVY (calculated)
-0.500
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQNDLRASR KMNSYVNLSH VYGYKSKCLA SSSSHSKRAT LLKTICSFLR RDSETMGRPW TPRFESHISP YKVSIPLIVE IKNKNQWLGA QVGIWENWAR
101: KMAKTKKMGR RRTMAADRRG RESFLVSLYI AGDRLHGQMS VWMEYNLHTL PAIVFMKRGQ EVDRVVGVKF DELERKLHKY AQSFFKNMKL LLAYQTKLLM
201: HDHLMPK
101: KMAKTKKMGR RRTMAADRRG RESFLVSLYI AGDRLHGQMS VWMEYNLHTL PAIVFMKRGQ EVDRVVGVKF DELERKLHKY AQSFFKNMKL LLAYQTKLLM
201: HDHLMPK
001: MGANVSTPDQ RFQVTHFRST KPWTPRPEIY PFKVNSPCIV EIKNMNQWKS RLNALKDTNK LLVIEFTAKW CGPCKTLEPK LEELAAKYTD VEFVKIDVDV
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF
Arabidopsis Description
TRX8Thioredoxin H8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAS1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.