Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28704 | Canola | plastid | 96.67 | 96.67 |
| Bra040596.1-P | Field mustard | plastid | 95.0 | 94.48 |
| CDY53739 | Canola | plastid | 88.33 | 87.85 |
| AT3G02730.1 | Thale cress | plastid | 85.56 | 86.52 |
| CDY38116 | Canola | plastid | 70.0 | 67.38 |
| CDY69984 | Canola | plastid | 69.44 | 67.2 |
| VIT_04s0023g00740.t01 | Wine grape | plastid | 56.11 | 58.72 |
| KRH00940 | Soybean | nucleus, plastid | 57.78 | 58.1 |
| KRH40285 | Soybean | plastid | 58.33 | 58.01 |
| GSMUA_Achr8P01040_001 | Banana | plastid | 54.44 | 54.75 |
| Solyc05g056300.2.1 | Tomato | plastid | 54.44 | 53.85 |
| PGSC0003DMT400059966 | Potato | cytosol, extracellular, plastid | 53.89 | 53.3 |
| TraesCS3B01G453600.1 | Wheat | plastid | 55.0 | 52.38 |
| TraesCS3A01G418400.1 | Wheat | plastid | 55.0 | 52.38 |
| Zm00001d024835_P001 | Maize | plastid | 52.22 | 52.22 |
| Os01t0913000-01 | Rice | plastid | 53.89 | 51.87 |
| KXG21303 | Sorghum | plastid | 51.11 | 47.92 |
| Zm00001d010871_P001 | Maize | plastid | 53.33 | 47.76 |
| GSMUA_Achr11P... | Banana | mitochondrion | 35.0 | 39.13 |
| CDX77974 | Canola | cytosol | 21.11 | 33.33 |
| CDY34470 | Canola | cytosol | 10.56 | 32.76 |
| CDX90669 | Canola | cytosol | 20.56 | 32.46 |
| CDY28996 | Canola | cytosol | 20.56 | 32.46 |
| CDY29406 | Canola | cytosol | 20.56 | 31.09 |
| CDY39355 | Canola | cytosol | 20.56 | 31.09 |
| CDY30901 | Canola | cytosol | 20.56 | 28.91 |
| CDY45144 | Canola | cytosol | 20.56 | 28.91 |
| CDY32970 | Canola | cytosol | 18.89 | 27.64 |
| CDY43592 | Canola | cytosol | 18.89 | 27.64 |
| CDY53958 | Canola | cytosol | 17.78 | 27.35 |
| CDY27290 | Canola | cytosol | 19.44 | 27.34 |
| CDY36029 | Canola | cytosol | 17.78 | 27.12 |
| CDX67442 | Canola | cytosol | 19.44 | 26.12 |
| CDY65333 | Canola | cytosol | 18.89 | 25.56 |
| CDY38768 | Canola | cytosol, plastid | 21.11 | 25.17 |
| CDY11645 | Canola | cytosol, plastid | 21.11 | 25.17 |
| CDY35999 | Canola | cytosol | 19.44 | 25.0 |
| CDX73940 | Canola | cytosol | 19.44 | 25.0 |
| CDY22165 | Canola | cytosol | 20.0 | 24.66 |
| CDY23543 | Canola | cytosol | 18.89 | 24.29 |
| CDY58647 | Canola | cytosol | 18.89 | 24.29 |
| CDY48387 | Canola | cytosol | 18.89 | 24.11 |
| CDY23544 | Canola | cytosol | 19.44 | 23.65 |
| CDY48388 | Canola | cytosol | 18.89 | 23.13 |
| CDY32015 | Canola | mitochondrion | 17.78 | 21.19 |
| CDX67647 | Canola | mitochondrion | 17.78 | 21.19 |
| CDY03743 | Canola | extracellular | 10.0 | 20.93 |
| CDY67121 | Canola | mitochondrion | 17.22 | 20.39 |
| CDY34646 | Canola | cytosol | 13.89 | 19.84 |
| CDY70695 | Canola | cytosol | 15.0 | 19.57 |
| CDX72138 | Canola | mitochondrion | 16.11 | 19.46 |
| CDY27215 | Canola | mitochondrion | 16.11 | 19.46 |
| CDY57101 | Canola | cytosol | 17.78 | 19.39 |
| CDY37032 | Canola | cytosol | 19.44 | 18.72 |
| CDY04457 | Canola | cytosol | 10.0 | 18.37 |
| CDX73752 | Canola | cytosol, mitochondrion | 21.11 | 17.27 |
| CDY27984 | Canola | nucleus | 19.44 | 16.59 |
| CDY11641 | Canola | plastid | 11.11 | 9.66 |
| CDY00656 | Canola | cytosol | 20.0 | 9.65 |
Protein Annotations
| MapMan:10.5.4 | Gene3D:3.40.30.10 | GO:A0A078IQ98 | UniProt:A0A078IQ98 | EnsemblPlants:CDY51539 | ProteinID:CDY51539 |
| ProteinID:CDY51539.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006662 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00003643001 | InterPro:IPR013766 | PFAM:PF00085 | PRINTS:PR00421 | ScanProsite:PS00194 |
| PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF258 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0004EEF6A1 | : | : | : |
Description
BnaA05g33390DBnaA05g33390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQ98]
Coordinates
chrLK033004:+:55072..60280
Molecular Weight (calculated)
19609.8 Da
IEP (calculated)
8.988
GRAVY (calculated)
-0.094
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLSLRLAPS PTALASTTGG YGPVKKQCRI PYSGVATTRI GFCSLDYGKR VESSVVRCSL ETVNVNVGQV TEVDKDTFWP IAKAAGEKIV VLDMYTQWCG
101: PCKVIAPKYK ALSEKYEDVV FLKLDCNPEN RPLVKELGLR VVPTFKIFKD NKVVKEVTGA KYDNLVEAIE TARSAAGSSG
101: PCKVIAPKYK ALSEKYEDVV FLKLDCNPEN RPLVKELGLR VVPTFKIFKD NKVVKEVTGA KYDNLVEAIE TARSAAGSSG
001: MPLSLRLSPS PTALSPTTGG FGPSRKQCRI PYSGVPTTKI GFCSLDSRKR GDSSVVRCSL ETVNVSVGQV TEVDKDTFWP IVKAAGEKLV VLDMYTQWCG
101: PCKVIAPKYK ALSEKYDDVV FLKLDCNPDN RPLAKELGIR VVPTFKILKD NKVVKEVTGA KYDDLVAAIE TARSAASG
101: PCKVIAPKYK ALSEKYDDVV FLKLDCNPDN RPLAKELGIR VVPTFKILKD NKVVKEVTGA KYDDLVAAIE TARSAASG
Arabidopsis Description
TRXF1TRXF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBJ7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.