Factsheet for TraesCS3B01G453600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G418400.1	Wheat	plastid	96.83	96.83
Os01t0913000-01	Rice	plastid	76.19	77.01
Zm00001d024835_P001	Maize	plastid	69.31	72.78
KXG21303	Sorghum	plastid	66.67	65.62
VIT_04s0023g00740.t01	Wine grape	plastid	58.73	64.53
Zm00001d010871_P001	Maize	plastid	68.25	64.18
GSMUA_Achr8P01040_001	Banana	plastid	59.26	62.57
KRH00940	Soybean	nucleus, plastid	57.14	60.34
AT3G02730.1	Thale cress	plastid	55.03	58.43
KRH40285	Soybean	plastid	55.56	58.01
Bra021417.1-P	Field mustard	plastid	55.03	57.14
Solyc05g056300.2.1	Tomato	plastid	55.03	57.14
CDY53739	Canola	plastid	54.5	56.91
PGSC0003DMT400059966	Potato	cytosol, extracellular, plastid	54.5	56.59
AT5G16400.1	Thale cress	plastid	54.5	55.68
CDY51539	Canola	plastid	52.38	55.0
Bra040596.1-P	Field mustard	plastid	51.85	54.14
CDY28704	Canola	plastid	51.32	53.89
CDY69984	Canola	plastid	52.38	53.23
Bra023564.1-P	Field mustard	plastid	51.32	51.87
CDY38116	Canola	plastid	50.79	51.34
GSMUA_Achr11P...	Banana	mitochondrion	35.98	42.24
TraesCS1B01G339000.1	Wheat	cytosol	20.63	33.05
TraesCS1B01G338800.1	Wheat	cytosol, golgi, plastid, unclear	21.69	32.28
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	22.22	32.06
TraesCS2B01G260500.1	Wheat	extracellular	15.34	30.53
TraesCS1B01G132600.1	Wheat	cytosol	19.05	27.48
TraesCS1B01G311300.1	Wheat	cytosol	17.99	23.78
TraesCS2B01G505100.1	Wheat	cytosol	16.4	22.3

Protein Annotations

MapMan:10.5.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006662	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766
PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51257	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF258	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
EnsemblPlantsGene:TraesCS3B01G453600	EnsemblPlants:TraesCS3B01G453600.1	TIGR:cd02947	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:+:694324532..694325779

Molecular Weight (calculated)

19933.1 Da

IEP (calculated)

8.280

GRAVY (calculated)

-0.020

Length

189 amino acids

Sequence
(BLAST)

001: MALRLSVSSP QSTASSPAIS SCRPAACGRF LACVAASQKR SLMAVSASDG RGVAPVKSGG LETATTGAGE VEAPTAAVAV TGQVTEVCKD TFWPIVKAAG
101: EKPVVLDMYT QWCGPCKVMA PKFQEMSEKD HDVVFLKLDC NQDNRPLAKE LGIRVVPTFK IFKDGKVAKE VTGAKIDELA RAIEEVKSS

Best Arabidopsis Sequence Match ( AT3G02730.1 )
(BLAST)

001: MPLSLRLSPS PTALSPTTGG FGPSRKQCRI PYSGVPTTKI GFCSLDSRKR GDSSVVRCSL ETVNVSVGQV TEVDKDTFWP IVKAAGEKLV VLDMYTQWCG
101: PCKVIAPKYK ALSEKYDDVV FLKLDCNPDN RPLAKELGIR VVPTFKILKD NKVVKEVTGA KYDDLVAAIE TARSAASG

Arabidopsis Description

TRXF1TRXF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBJ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.