Factsheet for TraesCS3A01G418400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G453600.1	Wheat	plastid	96.83	96.83
Os01t0913000-01	Rice	plastid	77.78	78.61
Zm00001d024835_P001	Maize	plastid	67.72	71.11
KXG21303	Sorghum	plastid	67.2	66.15
VIT_04s0023g00740.t01	Wine grape	plastid	59.79	65.7
Zm00001d010871_P001	Maize	plastid	67.2	63.18
GSMUA_Achr8P01040_001	Banana	plastid	59.79	63.13
KRH00940	Soybean	nucleus, plastid	56.08	59.22
AT3G02730.1	Thale cress	plastid	54.5	57.87
Bra021417.1-P	Field mustard	plastid	55.03	57.14
CDY53739	Canola	plastid	54.5	56.91
KRH40285	Soybean	plastid	54.5	56.91
Solyc05g056300.2.1	Tomato	plastid	54.5	56.59
PGSC0003DMT400059966	Potato	cytosol, extracellular, plastid	53.97	56.04
CDY51539	Canola	plastid	52.38	55.0
AT5G16400.1	Thale cress	plastid	53.44	54.59
Bra040596.1-P	Field mustard	plastid	51.85	54.14
CDY28704	Canola	plastid	51.32	53.89
CDY69984	Canola	plastid	51.85	52.69
Bra023564.1-P	Field mustard	plastid	50.26	50.8
CDY38116	Canola	plastid	50.26	50.8
GSMUA_Achr11P...	Banana	mitochondrion	36.51	42.86
TraesCS1A01G325600.1	Wheat	cytosol	23.81	34.62
TraesCS5A01G448200.1	Wheat	cytosol	21.69	31.3
TraesCS2A01G243200.1	Wheat	cytosol, golgi, plastid	19.05	30.51
TraesCS1A01G112400.1	Wheat	cytosol	19.58	28.24
TraesCS7A01G562100.1	Wheat	cytosol	14.29	25.47
TraesCS1A01G301500.1	Wheat	cytosol	17.99	23.78
TraesCS2A01G480300.1	Wheat	cytosol	16.4	22.3

Protein Annotations

MapMan:10.5.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006662	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766
PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51257	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF258	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
EnsemblPlantsGene:TraesCS3A01G418400	EnsemblPlants:TraesCS3A01G418400.1	TIGR:cd02947	SEG:seg	:	:

Description

No Description!

Coordinates

chr3A:+:660236949..660237795

Molecular Weight (calculated)

20017.2 Da

IEP (calculated)

8.033

GRAVY (calculated)

0.002

Length

189 amino acids

Sequence
(BLAST)

001: MALRLSVSSP QSTASSPAIS SCRPAACGRF LACVAASQKR SLMVVSGADA RAVAPVKSGG LETATTGADE VEAPTAAVAV TGQVTEVCKD TFWPIVKAAG
101: EKPVVLDMYT QWCGPCKVMA PKFQEMSEKD HDVVFLKLDC NQDNRPLAKE LGIRVVPTFK IFKDGKVAKE VTGAKIDELA RAIEEVKSS

Best Arabidopsis Sequence Match ( AT3G02730.1 )
(BLAST)

001: MPLSLRLSPS PTALSPTTGG FGPSRKQCRI PYSGVPTTKI GFCSLDSRKR GDSSVVRCSL ETVNVSVGQV TEVDKDTFWP IVKAAGEKLV VLDMYTQWCG
101: PCKVIAPKYK ALSEKYDDVV FLKLDCNPDN RPLAKELGIR VVPTFKILKD NKVVKEVTGA KYDDLVAAIE TARSAASG

Arabidopsis Description

TRXF1TRXF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBJ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.