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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38116 Canola plastid 95.7 95.19
Bra023564.1-P Field mustard plastid 94.62 94.12
AT5G16400.1 Thale cress plastid 81.18 81.62
CDY53739 Canola plastid 69.89 71.82
CDY51539 Canola plastid 67.2 69.44
CDY28704 Canola plastid 65.59 67.78
KRH00940 Soybean nucleus, plastid 58.6 60.89
KRH40285 Soybean plastid 57.53 59.12
VIT_04s0023g00740.t01 Wine grape plastid 54.3 58.72
Zm00001d024835_P001 Maize plastid 52.15 53.89
GSMUA_Achr8P01040_001 Banana plastid 51.61 53.63
Os01t0913000-01 Rice plastid 52.69 52.41
TraesCS3B01G453600.1 Wheat plastid 53.23 52.38
TraesCS3A01G418400.1 Wheat plastid 52.69 51.85
Solyc05g056300.2.1 Tomato plastid 50.0 51.1
PGSC0003DMT400059966 Potato cytosol, extracellular, plastid 50.0 51.1
KXG21303 Sorghum plastid 51.08 49.48
Zm00001d010871_P001 Maize plastid 51.61 47.76
GSMUA_Achr11P... Banana mitochondrion 38.17 44.1
CDX77974 Canola cytosol 23.12 37.72
CDX90669 Canola cytosol 22.58 36.84
CDY28996 Canola cytosol 22.04 35.96
CDY45144 Canola cytosol 23.66 34.38
CDY30901 Canola cytosol 23.66 34.38
CDY39355 Canola cytosol 21.51 33.61
CDY29406 Canola cytosol 21.51 33.61
CDY27290 Canola cytosol 22.58 32.81
CDY43592 Canola cytosol 21.51 32.52
CDY34470 Canola cytosol 9.68 31.03
CDY32970 Canola cytosol 20.43 30.89
CDX73940 Canola cytosol 22.58 30.0
CDY35999 Canola cytosol 22.58 30.0
CDY53958 Canola cytosol 18.82 29.91
CDX67442 Canola cytosol 21.51 29.85
CDY36029 Canola cytosol 18.82 29.66
CDY65333 Canola cytosol 20.97 29.32
CDY58647 Canola cytosol 22.04 29.29
CDY22165 Canola cytosol 22.58 28.77
CDY03743 Canola extracellular 12.9 27.91
CDY38768 Canola cytosol, plastid 22.04 27.15
CDY11645 Canola cytosol, plastid 22.04 27.15
CDY23544 Canola cytosol 21.51 27.03
CDY48388 Canola cytosol 20.97 26.53
CDY34646 Canola cytosol 17.74 26.19
CDY23543 Canola cytosol 19.35 25.71
CDY48387 Canola cytosol 19.35 25.53
CDX67647 Canola mitochondrion 19.89 24.5
CDY32015 Canola mitochondrion 19.89 24.5
CDY04457 Canola cytosol 12.9 24.49
CDY67121 Canola mitochondrion 19.89 24.34
CDY70695 Canola cytosol 17.74 23.91
CDX72138 Canola mitochondrion 18.82 23.49
CDY27215 Canola mitochondrion 18.82 23.49
CDY57101 Canola cytosol 18.82 21.21
CDY27984 Canola nucleus 22.58 19.91
CDY37032 Canola cytosol 19.89 19.79
CDX73752 Canola cytosol, mitochondrion 23.12 19.55
CDY11641 Canola plastid 12.9 11.59
CDY00656 Canola cytosol 23.12 11.53
Protein Annotations
MapMan:10.5.4Gene3D:3.40.30.10GO:A0A078JT23UniProt:A0A078JT23EnsemblPlants:CDY69984ProteinID:CDY69984
ProteinID:CDY69984.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006662
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0045454
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00094000001InterPro:IPR013766PFAM:PF00085PRINTS:PR00421ScanProsite:PS00194
PFscan:PS51352PANTHER:PTHR10438PANTHER:PTHR10438:SF258SUPFAM:SSF52833InterPro:ThioredoxinInterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CSInterPro:Thioredoxin_domainUniParc:UPI0004EEA7B4:::
Description
BnaA02g35040DBnaA02g35040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JT23]
Coordinates
chrLK040866:-:585..2017
Molecular Weight (calculated)
20152.6 Da
IEP (calculated)
9.088
GRAVY (calculated)
-0.082
Length
186 amino acids
Sequence
(BLAST)
001: MTLSLRIAPS PVSFRYSPAP STPSGVGLRP AKQRCRIPNS GVAAKTGSCS SGGVLDLRKR IAGSCVARCS LETVNVSVGE VTEVDKDTFW PIVKAAGDKL
101: VVLDMYTQWC GPCKVMAPKY KELSEKYQDM VFLKLDCNED NKPVAQELGI RVVPTFKILK DNKVIKEVVG AKFDELLSAI EAARSG
Best Arabidopsis Sequence Match ( AT5G16400.1 )
(BLAST)
001: MPLSLRLAPS PTSFRYSPIT STGAGGFSPV KQHCRIPNSG VATKIGFCSG GGGVLDSGRR IGSCVVRCSL ETVNVTVGQV TEVDKDTFWP IVKAAGDKIV
101: VLDMYTQWCG PCKVIAPKYK ELSEKYQDMV FLKLDCNQDN KPLAKELGIR VVPTFKILKD NKVVKEVTGA KYEDLLAAIE AARSG
Arabidopsis Description
TRXF2TRXF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDV9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.