Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003977.1-P | Field mustard | cytosol | 97.3 | 96.64 |
| CDY48388 | Canola | cytosol | 95.95 | 96.6 |
| CDY23543 | Canola | cytosol | 76.35 | 80.71 |
| CDY48387 | Canola | cytosol | 76.35 | 80.14 |
| CDY38768 | Canola | cytosol, plastid | 79.05 | 77.48 |
| CDY11645 | Canola | cytosol, plastid | 79.05 | 77.48 |
| AT1G69880.1 | Thale cress | plastid | 70.95 | 70.95 |
| PGSC0003DMT400045460 | Potato | cytosol | 21.62 | 47.06 |
| VIT_01s0026g01460.t01 | Wine grape | cytosol | 35.81 | 43.8 |
| KRH69384 | Soybean | cytosol | 37.84 | 43.75 |
| KRH74753 | Soybean | cytosol | 36.49 | 43.55 |
| CDY45144 | Canola | cytosol | 37.16 | 42.97 |
| KRH74754 | Soybean | cytosol | 36.49 | 42.86 |
| Solyc05g006830.2.1 | Tomato | cytosol, plastid | 38.51 | 42.22 |
| Solyc05g006870.2.1 | Tomato | cytosol | 38.51 | 42.22 |
| CDY27290 | Canola | cytosol | 36.49 | 42.19 |
| CDY30901 | Canola | cytosol | 36.49 | 42.19 |
| KRH69383 | Soybean | cytosol | 35.81 | 41.73 |
| PGSC0003DMT400045450 | Potato | cytosol | 37.84 | 41.48 |
| Solyc05g006860.2.1 | Tomato | cytosol | 37.16 | 40.74 |
| TraesCS5A01G448200.1 | Wheat | cytosol | 35.81 | 40.46 |
| HORVU5Hr1G107210.1 | Barley | cytosol | 35.81 | 40.46 |
| TraesCS5B01G452700.1 | Wheat | cytosol, golgi, unclear | 35.14 | 39.69 |
| TraesCS5D01G454800.1 | Wheat | cytosol | 35.14 | 39.69 |
| CDY53958 | Canola | cytosol | 31.08 | 39.32 |
| CDY65333 | Canola | cytosol | 35.14 | 39.1 |
| EER90722 | Sorghum | cytosol | 34.46 | 38.35 |
| CDY32970 | Canola | cytosol | 31.76 | 38.21 |
| CDX67442 | Canola | cytosol | 34.46 | 38.06 |
| KRG99185 | Soybean | cytosol, plastid | 31.08 | 38.02 |
| Solyc04g005810.2.1 | Tomato | plastid | 33.78 | 37.59 |
| CDY43592 | Canola | cytosol | 31.08 | 37.4 |
| CDY36029 | Canola | cytosol | 29.73 | 37.29 |
| KRH45834 | Soybean | cytosol, plastid | 30.41 | 37.19 |
| Zm00001d034491_P001 | Maize | plastid | 33.11 | 36.84 |
| HORVU5Hr1G107170.1 | Barley | cytosol | 35.81 | 36.55 |
| Solyc05g006850.2.1 | Tomato | cytosol | 33.11 | 36.3 |
| Os03t0800700-01 | Rice | plastid | 32.43 | 35.82 |
| KRH69387 | Soybean | plastid | 33.11 | 35.51 |
| GSMUA_Achr9P10960_001 | Banana | mitochondrion, plastid | 29.73 | 35.48 |
| GSMUA_Achr2P17710_001 | Banana | cytosol | 30.41 | 35.43 |
| CDX77974 | Canola | cytosol | 27.03 | 35.09 |
| Os07t0190800-01 | Rice | cytosol | 32.43 | 34.78 |
| CDY28996 | Canola | cytosol | 26.35 | 34.21 |
| CDX90669 | Canola | cytosol | 26.35 | 34.21 |
| KRH74748 | Soybean | plastid | 31.76 | 34.06 |
| CDY39355 | Canola | cytosol | 27.03 | 33.61 |
| CDY29406 | Canola | cytosol | 26.35 | 32.77 |
| CDY57101 | Canola | cytosol | 36.49 | 32.73 |
| CDY11641 | Canola | plastid | 44.59 | 31.88 |
| GSMUA_Achr7P16980_001 | Banana | cytosol | 21.62 | 31.07 |
| CDY37032 | Canola | cytosol | 38.51 | 30.48 |
| CDY03743 | Canola | extracellular | 17.57 | 30.23 |
| CDY27215 | Canola | mitochondrion | 29.05 | 28.86 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 22.3 | 28.45 |
| CDX72138 | Canola | mitochondrion | 28.38 | 28.19 |
| CDY34646 | Canola | cytosol | 22.97 | 26.98 |
| CDY70695 | Canola | cytosol | 25.0 | 26.81 |
| CDY04457 | Canola | cytosol | 17.57 | 26.53 |
| CDX67647 | Canola | mitochondrion | 27.03 | 26.49 |
| CDY32015 | Canola | mitochondrion | 27.03 | 26.49 |
| CDY67121 | Canola | mitochondrion | 26.35 | 25.66 |
| CDY58647 | Canola | cytosol | 23.65 | 25.0 |
| CDX73940 | Canola | cytosol | 22.97 | 24.29 |
| CDY34470 | Canola | cytosol | 9.46 | 24.14 |
| CDY35999 | Canola | cytosol | 22.3 | 23.57 |
| CDY22165 | Canola | cytosol | 22.97 | 23.29 |
| HORVU6Hr1G018190.1 | Barley | mitochondrion | 13.51 | 21.51 |
| CDY69984 | Canola | plastid | 27.03 | 21.51 |
| CDY38116 | Canola | plastid | 27.03 | 21.39 |
| CDY53739 | Canola | plastid | 24.32 | 19.89 |
| CDY28704 | Canola | plastid | 23.65 | 19.44 |
| CDY51539 | Canola | plastid | 23.65 | 19.44 |
| CDX73752 | Canola | cytosol, mitochondrion | 27.03 | 18.18 |
| CDY27984 | Canola | nucleus | 22.3 | 15.64 |
| CDY00656 | Canola | cytosol | 22.97 | 9.12 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | GO:A0A078GE12 | UniProt:A0A078GE12 | EnsemblPlants:CDY23544 | ProteinID:CDY23544 |
| ProteinID:CDY23544.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006662 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00022193001 | InterPro:IPR013766 | PFAM:PF00085 | PIRSF:PIRSF000077 | PRINTS:PR00421 |
| ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF243 | SUPFAM:SSF52833 | InterPro:Thioredoxin |
| InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0004EC8820 | : | : |
Description
BnaC06g25130DBnaC06g25130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GE12]
Coordinates
chrLK032144:-:505973..506812
Molecular Weight (calculated)
17129.8 Da
IEP (calculated)
9.546
GRAVY (calculated)
-0.404
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASTSSPTQ RFSLNDLRFR RPHTPGVEYE ISPYKVSPLI VEMKKKNQWK SRFNALKDTD KLLVIEFTAK WCGPCKSLEA KLEELAAKYT DVEFVKIDVD
101: VLKSVWKEYN LHALPTVVFM KRGQEVDRVV GLKLDEIEGK LHKYAYSF
101: VLKSVWKEYN LHALPTVVFM KRGQEVDRVV GLKLDEIEGK LHKYAYSF
001: MGANVSTPDQ RFQVTHFRST KPWTPRPEIY PFKVNSPCIV EIKNMNQWKS RLNALKDTNK LLVIEFTAKW CGPCKTLEPK LEELAAKYTD VEFVKIDVDV
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF
Arabidopsis Description
TRX8Thioredoxin H8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAS1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.