Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67442 | Canola | cytosol | 96.99 | 96.27 |
| AT5G39950.1 | Thale cress | cytosol | 83.46 | 83.46 |
| KRH01124 | Soybean | endoplasmic reticulum | 64.66 | 64.66 |
| PGSC0003DMT400003564 | Potato | plastid | 65.41 | 61.27 |
| VIT_14s0066g02560.t01 | Wine grape | cytosol | 61.65 | 60.29 |
| KRH40137 | Soybean | endoplasmic reticulum | 58.65 | 59.54 |
| KRH40136 | Soybean | endoplasmic reticulum | 67.67 | 57.32 |
| KRH01123 | Soybean | cytosol | 50.38 | 54.47 |
| KRH40138 | Soybean | cytosol, plastid | 50.38 | 53.6 |
| CDY57101 | Canola | cytosol | 65.41 | 52.73 |
| TraesCS5B01G452700.1 | Wheat | cytosol, golgi, unclear | 50.38 | 51.15 |
| TraesCS5D01G454800.1 | Wheat | cytosol | 50.38 | 51.15 |
| HORVU5Hr1G107210.1 | Barley | cytosol | 50.38 | 51.15 |
| TraesCS5A01G448200.1 | Wheat | cytosol | 49.62 | 50.38 |
| GSMUA_Achr2P17710_001 | Banana | cytosol | 45.86 | 48.03 |
| Os03t0800700-01 | Rice | plastid | 48.12 | 47.76 |
| Zm00001d034491_P001 | Maize | plastid | 47.37 | 47.37 |
| GSMUA_Achr9P10960_001 | Banana | mitochondrion, plastid | 43.61 | 46.77 |
| CDY37032 | Canola | cytosol | 65.41 | 46.52 |
| Os07t0190800-01 | Rice | cytosol | 48.12 | 46.38 |
| HORVU5Hr1G107170.1 | Barley | cytosol | 50.38 | 46.21 |
| EER90722 | Sorghum | cytosol | 45.86 | 45.86 |
| Solyc02g087630.2.1 | Tomato | plastid | 57.89 | 45.56 |
| CDY53958 | Canola | cytosol | 39.1 | 44.44 |
| KRH01119 | Soybean | cytosol | 46.62 | 44.29 |
| CDY36029 | Canola | cytosol | 39.1 | 44.07 |
| CDY32970 | Canola | cytosol | 40.6 | 43.9 |
| CDY29406 | Canola | cytosol | 39.1 | 43.7 |
| CDY39355 | Canola | cytosol | 39.1 | 43.7 |
| CDY43592 | Canola | cytosol | 39.85 | 43.09 |
| CDX90669 | Canola | cytosol | 36.84 | 42.98 |
| CDX77974 | Canola | cytosol | 36.84 | 42.98 |
| CDY28996 | Canola | cytosol | 36.84 | 42.98 |
| GSMUA_Achr7P16980_001 | Banana | cytosol | 32.33 | 41.75 |
| CDY30901 | Canola | cytosol | 39.1 | 40.62 |
| CDY45144 | Canola | cytosol | 39.1 | 40.62 |
| CDY27290 | Canola | cytosol | 38.35 | 39.84 |
| CDY34470 | Canola | cytosol | 15.79 | 36.21 |
| CDY23543 | Canola | cytosol | 37.59 | 35.71 |
| CDY48387 | Canola | cytosol | 37.59 | 35.46 |
| CDY23544 | Canola | cytosol | 39.1 | 35.14 |
| CDY38768 | Canola | cytosol, plastid | 38.35 | 33.77 |
| CDY11645 | Canola | cytosol, plastid | 38.35 | 33.77 |
| CDY48388 | Canola | cytosol | 36.84 | 33.33 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 28.57 | 32.76 |
| CDY03743 | Canola | extracellular | 21.05 | 32.56 |
| HORVU6Hr1G018190.1 | Barley | mitochondrion | 22.56 | 32.26 |
| CDY70695 | Canola | cytosol | 33.08 | 31.88 |
| CDY27215 | Canola | mitochondrion | 33.83 | 30.2 |
| CDX72138 | Canola | mitochondrion | 33.83 | 30.2 |
| CDY34646 | Canola | cytosol | 28.57 | 30.16 |
| CDX73940 | Canola | cytosol | 31.58 | 30.0 |
| CDY67121 | Canola | mitochondrion | 33.83 | 29.61 |
| CDX67647 | Canola | mitochondrion | 33.08 | 29.14 |
| CDY32015 | Canola | mitochondrion | 33.08 | 29.14 |
| CDY04457 | Canola | cytosol | 21.05 | 28.57 |
| CDY58647 | Canola | cytosol | 30.08 | 28.57 |
| CDY35999 | Canola | cytosol | 30.08 | 28.57 |
| CDY22165 | Canola | cytosol | 30.83 | 28.08 |
| CDX73752 | Canola | cytosol, mitochondrion | 36.84 | 22.27 |
| CDY38116 | Canola | plastid | 30.08 | 21.39 |
| CDY69984 | Canola | plastid | 29.32 | 20.97 |
| CDY27984 | Canola | nucleus | 30.08 | 18.96 |
| CDY51539 | Canola | plastid | 25.56 | 18.89 |
| CDY28704 | Canola | plastid | 25.56 | 18.89 |
| CDY53739 | Canola | plastid | 25.56 | 18.78 |
| CDY11641 | Canola | plastid | 18.05 | 11.59 |
| CDY00656 | Canola | cytosol | 30.83 | 10.99 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | GO:A0A078JCJ0 | UniProt:A0A078JCJ0 | EnsemblPlants:CDY65333 | ProteinID:CDY65333 |
| ProteinID:CDY65333.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006662 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00045633001 | InterPro:IPR013766 | PFAM:PF00085 | PIRSF:PIRSF000077 | PRINTS:PR00421 |
| ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF278 | SUPFAM:SSF52833 | InterPro:Thioredoxin |
| InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0004EB6C22 | SEG:seg | : |
Description
BnaCnng46660DThioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A078JCJ0]
Coordinates
chrLK034741:+:20391..21887
Molecular Weight (calculated)
14682.7 Da
IEP (calculated)
5.811
GRAVY (calculated)
-0.100
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVLSSVFG GGGEEAVAAN ESEQSRVMKF SSSARWQLHF NEIKESSKLL VVDFSASWCG PCRMIEPAFI AMAAKFTDVE FVKLDVDELP DVAKEFNVTG
101: MPTFVLVKNG KEIERIVGAR KDELEKKVLK HRA
101: MPTFVLVKNG KEIERIVGAR KDELEKKVLK HRA
001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
Arabidopsis Description
TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.