Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003564 | Potato | plastid | 72.79 | 69.72 |
| KRH01124 | Soybean | endoplasmic reticulum | 66.18 | 67.67 |
| AT5G39950.1 | Thale cress | cytosol | 61.03 | 62.41 |
| Bra028445.1-P | Field mustard | cytosol | 60.29 | 61.65 |
| CDY65333 | Canola | cytosol | 60.29 | 61.65 |
| CDX67442 | Canola | cytosol | 60.29 | 61.19 |
| Bra040318.1-P | Field mustard | cytosol | 58.09 | 60.77 |
| VIT_01s0026g01460.t01 | Wine grape | cytosol | 52.94 | 59.5 |
| KRH40137 | Soybean | endoplasmic reticulum | 56.62 | 58.78 |
| KRH40136 | Soybean | endoplasmic reticulum | 66.18 | 57.32 |
| Solyc02g087630.2.1 | Tomato | plastid | 67.65 | 54.44 |
| KRH01123 | Soybean | cytosol | 48.53 | 53.66 |
| KRH40138 | Soybean | cytosol, plastid | 47.79 | 52.0 |
| HORVU5Hr1G107210.1 | Barley | cytosol | 49.26 | 51.15 |
| TraesCS5A01G448200.1 | Wheat | cytosol | 49.26 | 51.15 |
| Zm00001d034491_P001 | Maize | plastid | 50.0 | 51.13 |
| EER90722 | Sorghum | cytosol | 50.0 | 51.13 |
| TraesCS5D01G454800.1 | Wheat | cytosol | 48.53 | 50.38 |
| TraesCS5B01G452700.1 | Wheat | cytosol, golgi, unclear | 48.53 | 50.38 |
| GSMUA_Achr2P17710_001 | Banana | cytosol | 45.59 | 48.82 |
| Os03t0800700-01 | Rice | plastid | 47.79 | 48.51 |
| CDY57101 | Canola | cytosol | 58.09 | 47.88 |
| GSMUA_Achr9P10960_001 | Banana | mitochondrion, plastid | 42.65 | 46.77 |
| Os07t0190800-01 | Rice | cytosol | 47.06 | 46.38 |
| HORVU5Hr1G107170.1 | Barley | cytosol | 49.26 | 46.21 |
| VIT_04s0023g02700.t01 | Wine grape | cytosol | 38.24 | 45.22 |
| VIT_18s0001g13250.t01 | Wine grape | cytosol | 37.5 | 44.74 |
| GSMUA_Achr7P16980_001 | Banana | cytosol | 33.09 | 43.69 |
| KRH01119 | Soybean | cytosol | 44.12 | 42.86 |
| CDY37032 | Canola | cytosol | 58.82 | 42.78 |
| HORVU6Hr1G018190.1 | Barley | mitochondrion | 22.79 | 33.33 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 27.94 | 32.76 |
| VIT_00s0532g00030.t01 | Wine grape | cytosol | 30.15 | 32.54 |
| VIT_19s0014g05090.t01 | Wine grape | cytosol | 28.68 | 30.95 |
| VIT_18s0001g13240.t01 | Wine grape | cytosol | 35.29 | 30.38 |
| VIT_08s0040g00020.t01 | Wine grape | cytosol | 27.21 | 26.62 |
| VIT_04s0023g00740.t01 | Wine grape | plastid | 27.21 | 21.51 |
Protein Annotations
| MapMan:10.6.1 | EntrezGene:100252624 | wikigene:100252624 | Gene3D:3.40.30.10 | UniProt:A5BD80 | ProteinID:AGG09342 |
| ProteinID:AGG09342.1 | EMBL:AM455184 | ProteinID:CAN70031 | ProteinID:CAN70031.1 | ProteinID:CBI35034 | ProteinID:CBI35034.3 |
| EMBL:FN596252 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006662 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016020 |
| GO:GO:0016671 | GO:GO:0019725 | GO:GO:0034599 | GO:GO:0045454 | GO:GO:0047134 | GO:GO:0055114 |
| GO:GO:0098869 | InterPro:IPR013766 | EMBL:KC195956 | EntrezGene:LOC100252624 | wikigene:LOC100252624 | PFAM:PF00085 |
| PIRSF:PIRSF000077 | PRINTS:PR00421 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF278 | SUPFAM:SSF52833 |
| TIGR:TC58829 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI00015209BA | ArrayExpress:VIT_14s0066g02560 |
| EnsemblPlantsGene:VIT_14s0066g02560 | EnsemblPlants:VIT_14s0066g02560.t01 | RefSeq:XP_002282318 | RefSeq:XP_002282318.1 | SEG:seg | : |
Description
Thioredoxin [Source:UniProtKB/TrEMBL;Acc:A5BD80]
Coordinates
chr14:-:28755934..28756776
Molecular Weight (calculated)
14807.7 Da
IEP (calculated)
5.687
GRAVY (calculated)
-0.138
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSVVSGLLG GGAADASDST LEGSGVNVFH SSERWLLHFN ASKESNQLMV IDFAATWCGP CKFMEPAVKS MASKYTDVDF VKIDVDELPD VAQEFTVQAM
101: PTFVLLKKGK ELERVIGAKK DELEKKIQKH RAVSNA
101: PTFVLLKKGK ELERVIGAKK DELEKKIQKH RAVSNA
001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
Arabidopsis Description
TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.