Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0532g00030.t01 | Wine grape | cytosol | 69.05 | 69.05 |
| AT1G11530.1 | Thale cress | cytosol | 60.32 | 64.41 |
| GSMUA_Achr9P30140_001 | Banana | cytosol | 68.25 | 64.18 |
| KRH55615 | Soybean | cytosol | 62.7 | 62.7 |
| KRH25890 | Soybean | nucleus | 62.7 | 62.7 |
| Solyc02g079960.2.1 | Tomato | cytosol | 60.32 | 60.8 |
| Bra031769.1-P | Field mustard | cytosol | 60.32 | 60.32 |
| PGSC0003DMT400055905 | Potato | cytosol | 59.52 | 60.0 |
| KRH22228 | Soybean | cytosol | 57.94 | 59.84 |
| CDY34646 | Canola | cytosol | 59.52 | 59.52 |
| KRH33304 | Soybean | cytosol | 57.94 | 57.94 |
| KRH27111 | Soybean | nucleus | 57.14 | 57.14 |
| GSMUA_Achr5P26380_001 | Banana | cytosol | 55.56 | 54.26 |
| Os04t0629500-01 | Rice | cytosol | 50.79 | 48.12 |
| Zm00001d026368_P001 | Maize | cytosol, extracellular | 46.83 | 45.74 |
| OQU82388 | Sorghum | cytosol | 46.03 | 44.96 |
| VIT_18s0001g13250.t01 | Wine grape | cytosol | 37.3 | 41.23 |
| TraesCS2A01G480300.1 | Wheat | cytosol | 45.24 | 41.01 |
| TraesCS2D01G479600.1 | Wheat | cytosol | 45.24 | 41.01 |
| HORVU2Hr1G107990.1 | Barley | cytosol | 44.44 | 40.58 |
| TraesCS2B01G505100.1 | Wheat | cytosol | 44.44 | 40.29 |
| VIT_01s0026g01460.t01 | Wine grape | cytosol | 34.92 | 36.36 |
| VIT_04s0023g02700.t01 | Wine grape | cytosol | 32.54 | 35.65 |
| VIT_08s0040g00020.t01 | Wine grape | cytosol | 33.33 | 30.22 |
| VIT_18s0001g13240.t01 | Wine grape | cytosol | 36.51 | 29.11 |
| VIT_14s0066g02560.t01 | Wine grape | cytosol | 30.95 | 28.68 |
| VIT_04s0023g00740.t01 | Wine grape | plastid | 25.4 | 18.6 |
Protein Annotations
| MapMan:10.6.1 | EntrezGene:100248576 | wikigene:100248576 | Gene3D:3.40.30.10 | ProteinID:AGG09344 | ProteinID:AGG09344.1 |
| ProteinID:CBI20498 | ProteinID:CBI20498.3 | UniProt:E0CT49 | EMBL:FN595229 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006662 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016671 |
| GO:GO:0019725 | GO:GO:0034599 | GO:GO:0045454 | GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 |
| InterPro:IPR013766 | EMBL:KC195958 | EntrezGene:LOC100248576 | wikigene:LOC100248576 | PFAM:PF00085 | PFscan:PS51352 |
| PANTHER:PTHR10438 | PANTHER:PTHR10438:SF364 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain |
| UniParc:UPI00015C7F10 | ArrayExpress:VIT_19s0014g05090 | EnsemblPlantsGene:VIT_19s0014g05090 | EnsemblPlants:VIT_19s0014g05090.t01 | RefSeq:XP_002280066 | RefSeq:XP_002280066.1 |
Description
Thioredoxin h-type [Source:UniProtKB/TrEMBL;Acc:E0CT49]
Coordinates
chr19:+:5398351..5399462
Molecular Weight (calculated)
14183.1 Da
IEP (calculated)
4.921
GRAVY (calculated)
-0.067
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGNQQLKES RVVKVDSEES WDLFFSQATN QGCPVVVHFT AAWCIPSVAM TAVFEDLALN YQDMLFLVVD VDEVKEVASK LEIKAMPTFL LMREGAQVDK
101: LVGANPDEIR KRTEAFIRSS RSHKMT
101: LVGANPDEIR KRTEAFIRSS RSHKMT
001: MARVVKIDSA ESWNFYVSQA KNQNCPIVAH FTALWCIPSV FMNSFFEELA FNYKDALFLI VDVDEVKEVA SQLEVKAMPT FLFLKDGNAM DKLVGANPDE
101: IKKRVDGFVQ SSRVVHIA
101: IKKRVDGFVQ SSRVVHIA
Arabidopsis Description
CXXS1Thioredoxin-like protein CXXS1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDI5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.