Factsheet for GSMUA_Achr9P10960_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P17710_001	Banana	cytosol	54.03	52.76
GSMUA_Achr7P16980_001	Banana	cytosol	42.74	51.46
KRH74754	Soybean	cytosol	50.0	49.21
KRH01123	Soybean	cytosol	48.39	48.78
VIT_01s0026g01460.t01	Wine grape	cytosol	47.58	48.76
KRH40137	Soybean	endoplasmic reticulum	50.81	48.09
KRH69383	Soybean	cytosol	49.19	48.03
PGSC0003DMT400045460	Potato	cytosol	25.81	47.06
KRH74753	Soybean	cytosol	46.77	46.77
KRH40138	Soybean	cytosol, plastid	46.77	46.4
KRH45834	Soybean	cytosol, plastid	45.16	46.28
GSMUA_Achr4P22400_001	Banana	cytosol, unclear	41.13	44.74
KRG99185	Soybean	cytosol, plastid	43.55	44.63
KRH01124	Soybean	endoplasmic reticulum	47.58	44.36
KRH69384	Soybean	cytosol	45.16	43.75
CDY65333	Canola	cytosol	46.77	43.61
Solyc05g006830.2.1	Tomato	cytosol, plastid	46.77	42.96
PGSC0003DMT400003564	Potato	plastid	49.19	42.96
Bra028445.1-P	Field mustard	cytosol	45.97	42.86
VIT_14s0066g02560.t01	Wine grape	cytosol	46.77	42.65
CDX67442	Canola	cytosol	45.97	42.54
Bra040318.1-P	Field mustard	cytosol	44.35	42.31
Solyc05g006870.2.1	Tomato	cytosol	45.97	42.22
PGSC0003DMT400045450	Potato	cytosol	45.97	42.22
AT5G39950.1	Thale cress	cytosol	45.16	42.11
AT1G59730.1	Thale cress	cytosol	43.55	41.86
Solyc05g006850.2.1	Tomato	cytosol	45.16	41.48
Solyc04g005810.2.1	Tomato	plastid	44.35	41.35
Solyc05g006860.2.1	Tomato	cytosol	44.35	40.74
CDY27290	Canola	cytosol	41.94	40.62
KRH01119	Soybean	cytosol	45.16	40.0
CDY45144	Canola	cytosol	41.13	39.84
Bra027837.1-P	Field mustard	cytosol	41.13	39.84
CDY30901	Canola	cytosol	41.13	39.84
GSMUA_Achr7P12220_001	Banana	cytosol	37.1	39.66
KRH40136	Soybean	endoplasmic reticulum	50.0	39.49
GSMUA_Achr2P17610_001	Banana	cytosol	36.29	39.47
Bra017898.1-P	Field mustard	cytosol	40.32	39.06
KRH74748	Soybean	plastid	40.32	36.23
KRH69387	Soybean	plastid	40.32	36.23
CDY57101	Canola	cytosol	44.35	33.33
Solyc02g087630.2.1	Tomato	plastid	43.55	31.95
Bra016258.1-P	Field mustard	cytosol	38.71	31.79
CDY38768	Canola	cytosol, plastid	38.71	31.79
CDY03743	Canola	extracellular	21.77	31.4
CDY11645	Canola	cytosol, plastid	37.9	31.13
CDY23543	Canola	cytosol	34.68	30.71
GSMUA_Achr5P27870_001	Banana	cytosol	34.68	30.5
CDY48387	Canola	cytosol	34.68	30.5
Bra003976.1-P	Field mustard	cytosol	34.68	30.5
AT1G69880.1	Thale cress	plastid	36.29	30.41
CDY23544	Canola	cytosol	35.48	29.73
Bra003977.1-P	Field mustard	cytosol	35.48	29.53
CDY37032	Canola	cytosol	44.35	29.41
CDY48388	Canola	cytosol	33.87	28.57
CDY04457	Canola	cytosol	21.77	27.55
GSMUA_Achr8P01700_001	Banana	cytosol	30.65	27.34
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	30.65	23.03
GSMUA_Achr5P26380_001	Banana	cytosol	23.39	22.48
GSMUA_Achr9P30140_001	Banana	cytosol	24.19	22.39
GSMUA_Achr8P01040_001	Banana	plastid	24.19	16.76
CDY11641	Canola	plastid	21.77	13.04
GSMUA_Achr11P...	Banana	mitochondrion	11.29	8.7

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006662	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr9G10960_001	EnsemblPlants:GSMUA_Achr9P10960_001	EnsemblPlants:GSMUA_Achr9T10960_001
InterPro:IPR013766	UniProt:M0TZA5	PFAM:PF00085	PIRSF:PIRSF000077	ScanProsite:PS00194	PFscan:PS51352
PANTHER:PTHR10438	PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI000296DC21	SEG:seg	:	:	:

Description

Thioredoxin H2-1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G10960_001]

Coordinates

chr9:-:7127782..7128547

Molecular Weight (calculated)

14249.2 Da

IEP (calculated)

8.737

GRAVY (calculated)

-0.429

Length

124 amino acids

Sequence
(BLAST)

001: MGNLFSRTSS GLVITIHSKG KWNQHWQSHL ASNKLMVIDF SSSNCGPCRF IKPEINAMAA RYTEIEFVKI DVDKLMEVAE KWDVEVVPTF VLVKRGKEVG
101: RVVGADKKEL EETIQQQQQH QQRY

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.