CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45834	Soybean	cytosol, plastid	96.69	96.69
KRH74754	Soybean	cytosol	70.25	67.46
KRH74753	Soybean	cytosol	67.77	66.13
KRH69383	Soybean	cytosol	68.59	65.35
KRH69384	Soybean	cytosol	66.94	63.28
VIT_01s0026g01460.t01	Wine grape	cytosol	61.98	61.98
KRH74748	Soybean	plastid	70.25	61.59
KRH69387	Soybean	plastid	67.77	59.42
PGSC0003DMT400045460	Potato	cytosol	33.06	58.82
PGSC0003DMT400045450	Potato	cytosol	59.5	53.33
Solyc05g006830.2.1	Tomato	cytosol, plastid	59.5	53.33
Solyc05g006870.2.1	Tomato	cytosol	59.5	53.33
Solyc05g006860.2.1	Tomato	cytosol	59.5	53.33
Solyc04g005810.2.1	Tomato	plastid	53.72	48.87
KRH01124	Soybean	endoplasmic reticulum	53.72	48.87
KRH40137	Soybean	endoplasmic reticulum	52.89	48.85
Solyc05g006850.2.1	Tomato	cytosol	51.24	45.93
KRH51778	Soybean	endoplasmic reticulum	43.8	45.3
KRH76717	Soybean	endoplasmic reticulum, nucleus	44.63	45.0
KRH28739	Soybean	cytosol	44.63	45.0
KRH15131	Soybean	cytosol, nucleus	43.8	44.54
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	44.63	43.55
KRH40138	Soybean	cytosol, plastid	44.63	43.2
KRH61100	Soybean	cytosol	41.32	42.73
GSMUA_Achr2P17710_001	Banana	cytosol	43.8	41.73
KRH05879	Soybean	endoplasmic reticulum	42.15	41.46
KRH01123	Soybean	cytosol	42.15	41.46
KRH40136	Soybean	endoplasmic reticulum	52.89	40.76
Os07t0190800-01	Rice	cytosol	45.45	39.86
HORVU5Hr1G107210.1	Barley	cytosol	42.98	39.69
TraesCS5A01G448200.1	Wheat	cytosol	42.98	39.69
AT1G59730.1	Thale cress	cytosol	42.15	39.53
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	42.15	38.93
TraesCS5D01G454800.1	Wheat	cytosol	42.15	38.93
GSMUA_Achr7P16980_001	Banana	cytosol	32.23	37.86
Os03t0800700-01	Rice	plastid	41.32	37.31
KRH10686	Soybean	cytosol	38.02	37.1
EER90722	Sorghum	cytosol	40.5	36.84
Zm00001d034491_P001	Maize	plastid	40.5	36.84
CDY45144	Canola	cytosol	38.84	36.72
CDY27290	Canola	cytosol	38.84	36.72
Bra027837.1-P	Field mustard	cytosol	38.84	36.72
KRH21649	Soybean	cytosol, plastid	37.19	36.0
Bra017898.1-P	Field mustard	cytosol	38.02	35.94
CDY30901	Canola	cytosol	38.02	35.94
HORVU5Hr1G107170.1	Barley	cytosol	42.98	35.86
KRH01119	Soybean	cytosol	38.84	33.57
AT1G69880.1	Thale cress	plastid	40.5	33.11
Bra016258.1-P	Field mustard	cytosol	40.5	32.45
CDY11645	Canola	cytosol, plastid	40.5	32.45
CDY38768	Canola	cytosol, plastid	40.5	32.45
CDY23543	Canola	cytosol	37.19	32.14
KRH22228	Soybean	cytosol	32.23	31.97
Bra003976.1-P	Field mustard	cytosol	37.19	31.91
CDY48387	Canola	cytosol	37.19	31.91
CDY23544	Canola	cytosol	38.02	31.08
KRH27111	Soybean	nucleus	32.23	30.95
Bra003977.1-P	Field mustard	cytosol	37.19	30.2
KRH25890	Soybean	nucleus	30.58	29.37
CDY48388	Canola	cytosol	35.54	29.25
HORVU6Hr1G018190.1	Barley	mitochondrion	22.31	29.03
KRH55615	Soybean	cytosol	29.75	28.57
KRH09556	Soybean	cytosol	32.23	28.47
GSMUA_Achr7P12220_001	Banana	cytosol	27.27	28.45
KRH33304	Soybean	cytosol	28.93	27.78
KRH00477	Soybean	cytosol	31.41	27.34
CDY03743	Canola	extracellular	19.01	26.74
KRH64869	Soybean	cytosol	31.41	24.84
CDY04457	Canola	cytosol	19.01	23.47
KRH40706	Soybean	mitochondrion	29.75	21.3
KRH00940	Soybean	nucleus, plastid	28.93	19.55
KRH40285	Soybean	plastid	28.93	19.34
CDY11641	Canola	plastid	19.01	11.11

Protein Annotations

MapMan:10.6.1	EntrezGene:100810192	Gene3D:3.40.30.10	EMBL:ACUP02010995	EnsemblPlantsGene:GLYMA_18G127400	GO:GO:0003674
GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006662	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035
GO:GO:0016671	GO:GO:0019725	GO:GO:0034599	GO:GO:0045454	GO:GO:0047134	GO:GO:0055114
GO:GO:0098869	UniProt:I1N197	InterPro:IPR013766	EnsemblPlants:KRG99185	ProteinID:KRG99185	ProteinID:KRG99185.1
PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	TIGRFAMs:TIGR01068	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI000233E851	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:17093217..17094911

Molecular Weight (calculated)

13968.0 Da

IEP (calculated)

8.233

GRAVY (calculated)

-0.293

Length

121 amino acids

Sequence
(BLAST)

001: MAMAYVARSS ESSQVLNFHS TAKWNAHFDA LKQTNKLMVV DFTASWCGPC KLMDPVIQEF ATKYRDVEFV KIDVDELMEV SQHYQVQGMP TFMLIKKGNV
101: ADKVVGVRKE ELQRLIEQHR K

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.