CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01123	Soybean	cytosol	60.0	68.29
KRH40138	Soybean	cytosol, plastid	52.14	58.4
KRH01124	Soybean	endoplasmic reticulum	50.0	52.63
KRH40137	Soybean	endoplasmic reticulum	48.57	51.91
CDY65333	Canola	cytosol	44.29	46.62
Bra028445.1-P	Field mustard	cytosol	43.57	45.86
AT5G39950.1	Thale cress	cytosol	43.57	45.86
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	42.86	45.8
TraesCS5A01G448200.1	Wheat	cytosol	42.86	45.8
HORVU5Hr1G107210.1	Barley	cytosol	42.86	45.8
TraesCS5D01G454800.1	Wheat	cytosol	42.86	45.8
CDX67442	Canola	cytosol	43.57	45.52
KRH61100	Soybean	cytosol	37.86	45.3
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	40.0	45.16
PGSC0003DMT400003564	Potato	plastid	45.71	45.07
Os03t0800700-01	Rice	plastid	42.86	44.78
KRH69384	Soybean	cytosol	40.71	44.53
KRH74754	Soybean	cytosol	40.0	44.44
Zm00001d034491_P001	Maize	plastid	42.14	44.36
KRH74753	Soybean	cytosol	39.29	44.35
VIT_14s0066g02560.t01	Wine grape	cytosol	42.86	44.12
EER90722	Sorghum	cytosol	41.43	43.61
KRH51778	Soybean	endoplasmic reticulum	36.43	43.59
GSMUA_Achr2P17710_001	Banana	cytosol	39.29	43.31
Bra040318.1-P	Field mustard	cytosol	40.0	43.08
KRH69383	Soybean	cytosol	38.57	42.52
Os07t0190800-01	Rice	cytosol	41.43	42.03
KRH40136	Soybean	endoplasmic reticulum	46.43	41.4
HORVU5Hr1G107170.1	Barley	cytosol	42.86	41.38
KRH15131	Soybean	cytosol, nucleus	35.0	41.18
GSMUA_Achr7P16980_001	Banana	cytosol	30.0	40.78
KRH45834	Soybean	cytosol, plastid	34.29	39.67
KRG99185	Soybean	cytosol, plastid	33.57	38.84
KRH76717	Soybean	endoplasmic reticulum, nucleus	32.86	38.33
KRH05879	Soybean	endoplasmic reticulum	33.57	38.21
KRH28739	Soybean	cytosol	31.43	36.67
KRH21649	Soybean	cytosol, plastid	32.14	36.0
KRH10686	Soybean	cytosol	31.43	35.48
CDY57101	Canola	cytosol	41.43	35.15
KRH69387	Soybean	plastid	34.29	34.78
KRH74748	Soybean	plastid	34.29	34.78
Solyc02g087630.2.1	Tomato	plastid	41.43	34.32
KRH09556	Soybean	cytosol	32.86	33.58
GSMUA_Achr7P12220_001	Banana	cytosol	26.43	31.9
KRH00477	Soybean	cytosol	31.43	31.65
KRH22228	Soybean	cytosol	26.43	30.33
KRH25890	Soybean	nucleus	27.14	30.16
HORVU6Hr1G018190.1	Barley	mitochondrion	20.0	30.11
CDY37032	Canola	cytosol	40.0	29.95
KRH64869	Soybean	cytosol	32.14	29.41
KRH27111	Soybean	nucleus	26.43	29.37
KRH55615	Soybean	cytosol	26.43	29.37
KRH33304	Soybean	cytosol	24.29	26.98
KRH40706	Soybean	mitochondrion	30.0	24.85
KRH00940	Soybean	nucleus, plastid	25.71	20.11
KRH40285	Soybean	plastid	25.71	19.89

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	EMBL:ACUP02011501	EnsemblPlantsGene:GLYMA_18G255200	GO:GO:0003674	GO:GO:0003824
GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006662
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0016671
GO:GO:0019725	GO:GO:0034599	GO:GO:0045454	GO:GO:0047134	GO:GO:0055114	GO:GO:0098869
InterPro:IPR013766	UniProt:K7MUQ3	EnsemblPlants:KRH01119	ProteinID:KRH01119	ProteinID:KRH01119.1	PFAM:PF00085
PIRSF:PIRSF000077	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF243
SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0002953868

Description

hypothetical protein

Coordinates

chr18:-:54160047..54161267

Molecular Weight (calculated)

15697.5 Da

IEP (calculated)

5.037

GRAVY (calculated)

-0.465

Length

140 amino acids

Sequence
(BLAST)

001: MGSLFSSPSA TEAENPDVKA GNPDVKARSS DHVKAFDSAE SWQSYWKEIK DSPKPVVIFF TASWCGPCKF ITPLFHEMAA KYPNADYVKI DVEELSGVAE
101: EYEVRAMPTF VAWKEGKEVE RFVGANKVEL EKKIKQLSQS

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.