Factsheet for GSMUA_Achr2P17710_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P16980_001	Banana	cytosol	63.78	78.64
TraesCS5D01G454800.1	Wheat	cytosol	63.78	61.83
TraesCS5A01G448200.1	Wheat	cytosol	62.99	61.07
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	62.99	61.07
EER90722	Sorghum	cytosol	61.42	58.65
Os03t0800700-01	Rice	plastid	60.63	57.46
Zm00001d034491_P001	Maize	plastid	59.84	57.14
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	52.76	54.03
Os07t0190800-01	Rice	cytosol	55.12	50.72
KRH40137	Soybean	endoplasmic reticulum	51.18	49.62
KRH01123	Soybean	cytosol	48.03	49.59
KRH01124	Soybean	endoplasmic reticulum	51.18	48.87
PGSC0003DMT400045460	Potato	cytosol	25.2	47.06
PGSC0003DMT400003564	Potato	plastid	51.97	46.48
KRH40138	Soybean	cytosol, plastid	45.67	46.4
VIT_01s0026g01460.t01	Wine grape	cytosol	44.09	46.28
KRH74754	Soybean	cytosol	45.67	46.03
AT5G39950.1	Thale cress	cytosol	48.03	45.86
CDY65333	Canola	cytosol	48.03	45.86
GSMUA_Achr4P22400_001	Banana	cytosol, unclear	40.94	45.61
VIT_14s0066g02560.t01	Wine grape	cytosol	48.82	45.59
Bra040318.1-P	Field mustard	cytosol	46.46	45.38
Bra028445.1-P	Field mustard	cytosol	47.24	45.11
KRH69383	Soybean	cytosol	44.88	44.88
CDX67442	Canola	cytosol	47.24	44.78
Solyc05g006830.2.1	Tomato	cytosol, plastid	47.24	44.44
KRH74753	Soybean	cytosol	43.31	44.35
KRH45834	Soybean	cytosol, plastid	41.73	43.8
KRG99185	Soybean	cytosol, plastid	41.73	43.8
PGSC0003DMT400045450	Potato	cytosol	46.46	43.7
Solyc04g005810.2.1	Tomato	plastid	45.67	43.61
Solyc05g006870.2.1	Tomato	cytosol	45.67	42.96
Solyc05g006860.2.1	Tomato	cytosol	45.67	42.96
GSMUA_Achr7P12220_001	Banana	cytosol	38.58	42.24
KRH40136	Soybean	endoplasmic reticulum	50.39	40.76
KRH69384	Soybean	cytosol	40.16	39.84
KRH01119	Soybean	cytosol	43.31	39.29
AT1G59730.1	Thale cress	cytosol	38.58	37.98
Solyc05g006850.2.1	Tomato	cytosol	40.16	37.78
Bra027837.1-P	Field mustard	cytosol	37.01	36.72
CDY45144	Canola	cytosol	37.01	36.72
CDY30901	Canola	cytosol	37.01	36.72
KRH69387	Soybean	plastid	39.37	36.23
Solyc02g087630.2.1	Tomato	plastid	48.03	36.09
CDY27290	Canola	cytosol	36.22	35.94
Bra017898.1-P	Field mustard	cytosol	36.22	35.94
KRH74748	Soybean	plastid	38.58	35.51
CDY57101	Canola	cytosol	45.67	35.15
GSMUA_Achr2P17610_001	Banana	cytosol	30.71	34.21
CDY23543	Canola	cytosol	36.22	32.86
CDY48387	Canola	cytosol	36.22	32.62
Bra003976.1-P	Field mustard	cytosol	36.22	32.62
CDY38768	Canola	cytosol, plastid	38.58	32.45
Bra016258.1-P	Field mustard	cytosol	38.58	32.45
CDY37032	Canola	cytosol	47.24	32.09
CDY11645	Canola	cytosol, plastid	37.8	31.79
GSMUA_Achr5P27870_001	Banana	cytosol	33.86	30.5
CDY23544	Canola	cytosol	35.43	30.41
AT1G69880.1	Thale cress	plastid	34.65	29.73
Bra003977.1-P	Field mustard	cytosol	34.65	29.53
CDY48388	Canola	cytosol	33.07	28.57
GSMUA_Achr8P01700_001	Banana	cytosol	30.71	28.06
GSMUA_Achr9P30140_001	Banana	cytosol	28.35	26.87
GSMUA_Achr5P26380_001	Banana	cytosol	26.77	26.36
CDY03743	Canola	extracellular	17.32	25.58
CDY04457	Canola	cytosol	18.9	24.49
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	29.13	22.42
GSMUA_Achr8P01040_001	Banana	plastid	23.62	16.76
CDY11641	Canola	plastid	19.68	12.08
GSMUA_Achr11P...	Banana	mitochondrion	14.17	11.18

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006662	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr2G17710_001	EnsemblPlants:GSMUA_Achr2P17710_001	EnsemblPlants:GSMUA_Achr2T17710_001
InterPro:IPR013766	UniProt:M0S8W2	PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421	ScanProsite:PS00194
PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF243	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI000294C229	:	:	:

Description

Thioredoxin H2-2 [Source:GMGC_GENE;Acc:GSMUA_Achr2G17710_001]

Coordinates

chr2:-:18148165..18148978

Molecular Weight (calculated)

14084.7 Da

IEP (calculated)

5.160

GRAVY (calculated)

-0.199

Length

127 amino acids

Sequence
(BLAST)

001: MGGFFSSQPA YAAEDGVSAV IAIHSAGEWT QNWESHSQTN KLMVIDFSAS WCGPCRFVEP AFKAMATQYS DAVFVKINVD EIPEVSKQWK VQAMPTFVLV
101: KGGQEVGRIV GAKKDELERR IQEQINT

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.